BLASTX nr result
ID: Coptis25_contig00029654
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00029654 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN78112.1| hypothetical protein VITISV_004431 [Vitis vinifera] 173 1e-41 emb|CBI33905.3| unnamed protein product [Vitis vinifera] 171 6e-41 ref|XP_002278575.1| PREDICTED: uncharacterized protein LOC100250... 171 6e-41 ref|XP_002329522.1| predicted protein [Populus trichocarpa] gi|2... 163 1e-38 ref|XP_002519840.1| conserved hypothetical protein [Ricinus comm... 161 4e-38 >emb|CAN78112.1| hypothetical protein VITISV_004431 [Vitis vinifera] Length = 231 Score = 173 bits (439), Expect = 1e-41 Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 1/105 (0%) Frame = +2 Query: 17 CVSNYILPRWKRNPSSFFDWNKRKAN-EEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCC 193 CVSN L WK +P S F WN K N ++ PQPKYHD+DLPFSPSL+ KTFL+GRELKCC Sbjct: 4 CVSNSSLQWWKTSPRSLFGWNTGKKNTDDSPQPKYHDLDLPFSPSLVAKTFLRGRELKCC 63 Query: 194 YTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328 Y AS DGFSAT+FH C DFKGPCV+IGYTNKSFKFGAFNPEGYRS Sbjct: 64 YKASIDGFSATNFHGCCDFKGPCVIIGYTNKSFKFGAFNPEGYRS 108 >emb|CBI33905.3| unnamed protein product [Vitis vinifera] Length = 737 Score = 171 bits (433), Expect = 6e-41 Identities = 78/105 (74%), Positives = 87/105 (82%), Gaps = 1/105 (0%) Frame = +2 Query: 17 CVSNYILPRWKRNPSSFFDWNK-RKANEEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCC 193 CVSN L WK +P S F WN RK ++ PQPKY+DIDLPFSPSL+ KTFL+G+ELKCC Sbjct: 512 CVSNSALQWWKTSPRSLFGWNTGRKNTDDSPQPKYYDIDLPFSPSLVAKTFLRGKELKCC 571 Query: 194 YTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328 Y AS DGFSAT+FH C DFKGPCV+IGYTNKSFKFGAFNPEGYRS Sbjct: 572 YKASIDGFSATNFHGCCDFKGPCVIIGYTNKSFKFGAFNPEGYRS 616 >ref|XP_002278575.1| PREDICTED: uncharacterized protein LOC100250549 [Vitis vinifera] Length = 229 Score = 171 bits (433), Expect = 6e-41 Identities = 78/105 (74%), Positives = 87/105 (82%), Gaps = 1/105 (0%) Frame = +2 Query: 17 CVSNYILPRWKRNPSSFFDWNK-RKANEEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCC 193 CVSN L WK +P S F WN RK ++ PQPKY+DIDLPFSPSL+ KTFL+G+ELKCC Sbjct: 4 CVSNSALQWWKTSPRSLFGWNTGRKNTDDSPQPKYYDIDLPFSPSLVAKTFLRGKELKCC 63 Query: 194 YTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328 Y AS DGFSAT+FH C DFKGPCV+IGYTNKSFKFGAFNPEGYRS Sbjct: 64 YKASIDGFSATNFHGCCDFKGPCVIIGYTNKSFKFGAFNPEGYRS 108 >ref|XP_002329522.1| predicted protein [Populus trichocarpa] gi|222870231|gb|EEF07362.1| predicted protein [Populus trichocarpa] Length = 229 Score = 163 bits (413), Expect = 1e-38 Identities = 76/108 (70%), Positives = 90/108 (83%), Gaps = 2/108 (1%) Frame = +2 Query: 11 MACVSNYILPRWKR-NPSSFFDWNKRKAN-EEKPQPKYHDIDLPFSPSLLNKTFLQGREL 184 MACVSN W++ +P S F WN K N ++PQPKYH++DLPFS SL++KTFL+GREL Sbjct: 1 MACVSNSACHVWRKTSPQSLFGWNIGKRNTNDRPQPKYHEVDLPFSTSLVDKTFLRGREL 60 Query: 185 KCCYTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328 KCCY A+ DGFSAT+FH+ SDFKGPCV+IGYTNKSFKFGAFNPEGYRS Sbjct: 61 KCCYKATIDGFSATNFHDGSDFKGPCVIIGYTNKSFKFGAFNPEGYRS 108 >ref|XP_002519840.1| conserved hypothetical protein [Ricinus communis] gi|223540886|gb|EEF42444.1| conserved hypothetical protein [Ricinus communis] Length = 233 Score = 161 bits (408), Expect = 4e-38 Identities = 72/95 (75%), Positives = 83/95 (87%), Gaps = 1/95 (1%) Frame = +2 Query: 47 KRNPSSFFDWN-KRKANEEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCCYTASKDGFSA 223 KR+P S F WN +K + ++PQPKYHD+DLPF SL++ TFL+GRELKCCY A+ DGFSA Sbjct: 15 KRSPQSLFGWNIGKKTSNDRPQPKYHDVDLPFPLSLVDNTFLKGRELKCCYKATIDGFSA 74 Query: 224 TSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328 T+FHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS Sbjct: 75 TNFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 109