BLASTX nr result

ID: Coptis25_contig00029654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029654
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78112.1| hypothetical protein VITISV_004431 [Vitis vinifera]   173   1e-41
emb|CBI33905.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002278575.1| PREDICTED: uncharacterized protein LOC100250...   171   6e-41
ref|XP_002329522.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_002519840.1| conserved hypothetical protein [Ricinus comm...   161   4e-38

>emb|CAN78112.1| hypothetical protein VITISV_004431 [Vitis vinifera]
          Length = 231

 Score =  173 bits (439), Expect = 1e-41
 Identities = 79/105 (75%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17  CVSNYILPRWKRNPSSFFDWNKRKAN-EEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCC 193
           CVSN  L  WK +P S F WN  K N ++ PQPKYHD+DLPFSPSL+ KTFL+GRELKCC
Sbjct: 4   CVSNSSLQWWKTSPRSLFGWNTGKKNTDDSPQPKYHDLDLPFSPSLVAKTFLRGRELKCC 63

Query: 194 YTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328
           Y AS DGFSAT+FH C DFKGPCV+IGYTNKSFKFGAFNPEGYRS
Sbjct: 64  YKASIDGFSATNFHGCCDFKGPCVIIGYTNKSFKFGAFNPEGYRS 108


>emb|CBI33905.3| unnamed protein product [Vitis vinifera]
          Length = 737

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/105 (74%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17  CVSNYILPRWKRNPSSFFDWNK-RKANEEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCC 193
           CVSN  L  WK +P S F WN  RK  ++ PQPKY+DIDLPFSPSL+ KTFL+G+ELKCC
Sbjct: 512 CVSNSALQWWKTSPRSLFGWNTGRKNTDDSPQPKYYDIDLPFSPSLVAKTFLRGKELKCC 571

Query: 194 YTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328
           Y AS DGFSAT+FH C DFKGPCV+IGYTNKSFKFGAFNPEGYRS
Sbjct: 572 YKASIDGFSATNFHGCCDFKGPCVIIGYTNKSFKFGAFNPEGYRS 616


>ref|XP_002278575.1| PREDICTED: uncharacterized protein LOC100250549 [Vitis vinifera]
          Length = 229

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/105 (74%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
 Frame = +2

Query: 17  CVSNYILPRWKRNPSSFFDWNK-RKANEEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCC 193
           CVSN  L  WK +P S F WN  RK  ++ PQPKY+DIDLPFSPSL+ KTFL+G+ELKCC
Sbjct: 4   CVSNSALQWWKTSPRSLFGWNTGRKNTDDSPQPKYYDIDLPFSPSLVAKTFLRGKELKCC 63

Query: 194 YTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328
           Y AS DGFSAT+FH C DFKGPCV+IGYTNKSFKFGAFNPEGYRS
Sbjct: 64  YKASIDGFSATNFHGCCDFKGPCVIIGYTNKSFKFGAFNPEGYRS 108


>ref|XP_002329522.1| predicted protein [Populus trichocarpa] gi|222870231|gb|EEF07362.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/108 (70%), Positives = 90/108 (83%), Gaps = 2/108 (1%)
 Frame = +2

Query: 11  MACVSNYILPRWKR-NPSSFFDWNKRKAN-EEKPQPKYHDIDLPFSPSLLNKTFLQGREL 184
           MACVSN     W++ +P S F WN  K N  ++PQPKYH++DLPFS SL++KTFL+GREL
Sbjct: 1   MACVSNSACHVWRKTSPQSLFGWNIGKRNTNDRPQPKYHEVDLPFSTSLVDKTFLRGREL 60

Query: 185 KCCYTASKDGFSATSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328
           KCCY A+ DGFSAT+FH+ SDFKGPCV+IGYTNKSFKFGAFNPEGYRS
Sbjct: 61  KCCYKATIDGFSATNFHDGSDFKGPCVIIGYTNKSFKFGAFNPEGYRS 108


>ref|XP_002519840.1| conserved hypothetical protein [Ricinus communis]
           gi|223540886|gb|EEF42444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 233

 Score =  161 bits (408), Expect = 4e-38
 Identities = 72/95 (75%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
 Frame = +2

Query: 47  KRNPSSFFDWN-KRKANEEKPQPKYHDIDLPFSPSLLNKTFLQGRELKCCYTASKDGFSA 223
           KR+P S F WN  +K + ++PQPKYHD+DLPF  SL++ TFL+GRELKCCY A+ DGFSA
Sbjct: 15  KRSPQSLFGWNIGKKTSNDRPQPKYHDVDLPFPLSLVDNTFLKGRELKCCYKATIDGFSA 74

Query: 224 TSFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 328
           T+FHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS
Sbjct: 75  TNFHNCSDFKGPCVVIGYTNKSFKFGAFNPEGYRS 109


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