BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029653
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...    99   5e-19
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr...    98   6e-19
sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protei...    98   6e-19
ref|XP_002307729.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-prote...    95   5e-18

>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/86 (56%), Positives = 68/86 (79%)
 Frame = +2

Query: 50   KVFSLSTGAAIRSLPTGFDINCIAVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGN 229
            K+FSLS+   + SL TG DI+ IA+N+ F+F GTK G I+V L+++L RV S++++G G+
Sbjct: 1393 KIFSLSSKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLKDKLTRVASIKMAG-GH 1451

Query: 230  TRVTSLTSDSDGDMLFAGSSDGKIQV 307
            T++TSL SD+DG MLF GSSDGKIQV
Sbjct: 1452 TKITSLVSDADGMMLFVGSSDGKIQV 1477


>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
            gi|358346073|ref|XP_003637097.1| U-box domain-containing
            protein [Medicago truncatula] gi|355480708|gb|AES61911.1|
            U-box domain-containing protein [Medicago truncatula]
            gi|355503032|gb|AES84235.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 1490

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/86 (54%), Positives = 67/86 (77%)
 Frame = +2

Query: 50   KVFSLSTGAAIRSLPTGFDINCIAVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGN 229
            K+FSLS+   + SL TG D++ +A+N+ F+F GTK G I+V L+++  RV S++++G GN
Sbjct: 1402 KIFSLSSKMVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAG-GN 1460

Query: 230  TRVTSLTSDSDGDMLFAGSSDGKIQV 307
            T++TSL SD+DG MLF GSSDGKIQV
Sbjct: 1461 TKITSLASDADGMMLFVGSSDGKIQV 1486


>sp|D1FP53.1|LIN_MEDTR RecName: Full=Putative E3 ubiquitin-protein ligase LIN; Short=MtLIN
            gi|219522090|gb|ACL14419.1| putative E3 ubiquitin ligase
            [Medicago truncatula] gi|219522092|gb|ACL14420.1|
            putative E3 ubiquitin ligase [Medicago truncatula]
          Length = 1488

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/86 (54%), Positives = 67/86 (77%)
 Frame = +2

Query: 50   KVFSLSTGAAIRSLPTGFDINCIAVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGN 229
            K+FSLS+   + SL TG D++ +A+N+ F+F GTK G I+V L+++  RV S++++G GN
Sbjct: 1400 KIFSLSSKMVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAG-GN 1458

Query: 230  TRVTSLTSDSDGDMLFAGSSDGKIQV 307
            T++TSL SD+DG MLF GSSDGKIQV
Sbjct: 1459 TKITSLASDADGMMLFVGSSDGKIQV 1484


>ref|XP_002307729.1| predicted protein [Populus trichocarpa] gi|222857178|gb|EEE94725.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/85 (56%), Positives = 62/85 (72%)
 Frame = +2

Query: 50  KVFSLSTGAAIRSLPTGFDINCIAVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGN 229
           KVFS S+ A   S  TGFDI  IAVN+ F+FT TK G+I+V L+ER+ RV S+++    +
Sbjct: 64  KVFSHSSKAVTGSFSTGFDIQRIAVNSDFIFTATKSGIIEVWLKERVTRVASIKVGSGWH 123

Query: 230 TRVTSLTSDSDGDMLFAGSSDGKIQ 304
            R+T LTSD DG ML+AG+SDGKIQ
Sbjct: 124 ARITCLTSDMDGAMLYAGTSDGKIQ 148


>sp|C6L7U1.2|LIN1_LOTJA RecName: Full=Putative E3 ubiquitin-protein ligase LIN-1; AltName:
            Full=Protein cerberus
          Length = 1485

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 48/86 (55%), Positives = 65/86 (75%)
 Frame = +2

Query: 50   KVFSLSTGAAIRSLPTGFDINCIAVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGN 229
            K+FSLS    + SL TG DI+ IA+N+ F+F GTK G I+V L+++  RV S++++G G+
Sbjct: 1397 KIFSLSQKMVVGSLSTGLDIHRIAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAG-GH 1455

Query: 230  TRVTSLTSDSDGDMLFAGSSDGKIQV 307
            T++TSL SD DG MLF GSSDGKIQV
Sbjct: 1456 TKITSLVSDVDGMMLFVGSSDGKIQV 1481