BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029647
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   248   5e-64
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   248   5e-64
ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago tr...   246   1e-63
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...   246   1e-63
gb|AFW70820.1| putative RNA helicase family protein [Zea mays]        245   3e-63

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  248 bits (632), Expect = 5e-64
 Identities = 119/139 (85%), Positives = 128/139 (92%)
 Frame = -2

Query: 417  QDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLVKNQPVYI 238
            QDVRKQLLTIMD+Y LDVVSAGK F+KIRKAI AGFFFHAARKDPQEGYRTLV+NQPVYI
Sbjct: 1030 QDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1089

Query: 237  HPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTKMSKRKQQ 58
            HPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TKMSKRK+Q
Sbjct: 1090 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQ 1149

Query: 57   E*IEPLYNRFDEPNSWRLS 1
            E IEPLY+R+ EPNSWRLS
Sbjct: 1150 ERIEPLYDRYHEPNSWRLS 1168


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  248 bits (632), Expect = 5e-64
 Identities = 119/139 (85%), Positives = 128/139 (92%)
 Frame = -2

Query: 417  QDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLVKNQPVYI 238
            QDVRKQLLTIMD+Y LDVVSAGK F+KIRKAI AGFFFHAARKDPQEGYRTLV+NQPVYI
Sbjct: 1033 QDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1092

Query: 237  HPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTKMSKRKQQ 58
            HPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TKMSKRK+Q
Sbjct: 1093 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQ 1152

Query: 57   E*IEPLYNRFDEPNSWRLS 1
            E IEPLY+R+ EPNSWRLS
Sbjct: 1153 ERIEPLYDRYHEPNSWRLS 1171


>ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago truncatula]
            gi|355481780|gb|AES62983.1| ATP-dependent RNA helicase
            DHX8 [Medicago truncatula]
          Length = 1154

 Score =  246 bits (629), Expect = 1e-63
 Identities = 117/139 (84%), Positives = 128/139 (92%)
 Frame = -2

Query: 417  QDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLVKNQPVYI 238
            QDVRKQLL+IMD+Y LD+VSAGK FSKIRKAI AGFFFHAARKDPQEGYRTLV+NQPVYI
Sbjct: 1012 QDVRKQLLSIMDKYKLDIVSAGKNFSKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1071

Query: 237  HPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTKMSKRKQQ 58
            HPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TKMSKRK+Q
Sbjct: 1072 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQ 1131

Query: 57   E*IEPLYNRFDEPNSWRLS 1
            E +EPLY+R+ EPNSWRLS
Sbjct: 1132 ERVEPLYDRYHEPNSWRLS 1150


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1177

 Score =  246 bits (628), Expect = 1e-63
 Identities = 118/139 (84%), Positives = 128/139 (92%)
 Frame = -2

Query: 417  QDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLVKNQPVYI 238
            QDVRKQLL+IMD+Y LDVVSAGK F+KIRKAI AGFFFHAARKDPQEGYRTLV+NQPVYI
Sbjct: 1035 QDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1094

Query: 237  HPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTKMSKRKQQ 58
            HPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRFFKVAD TKMSKRK+Q
Sbjct: 1095 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQ 1154

Query: 57   E*IEPLYNRFDEPNSWRLS 1
            E IEPLY+R+ EPNSWRLS
Sbjct: 1155 ERIEPLYDRYHEPNSWRLS 1173


>gb|AFW70820.1| putative RNA helicase family protein [Zea mays]
          Length = 1236

 Score =  245 bits (625), Expect = 3e-63
 Identities = 118/139 (84%), Positives = 127/139 (91%)
 Frame = -2

Query: 417  QDVRKQLLTIMDRYGLDVVSAGKEFSKIRKAIVAGFFFHAARKDPQEGYRTLVKNQPVYI 238
            QDVRKQLLTIMDRY LDVVSAGK F+KIRKAI AGFFFHAARKDPQEGYRTLV+NQPVYI
Sbjct: 1094 QDVRKQLLTIMDRYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1153

Query: 237  HPSCSLFQRQPDWLIYDELVRTTKEYMRECTAVDPKWLVELAPRFFKVADSTKMSKRKQQ 58
            HPS +LFQRQPDW+IY ELV TTKEYMRE T +DPKWLVELAPRF+K AD TKMSKRK+Q
Sbjct: 1154 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFYKGADPTKMSKRKRQ 1213

Query: 57   E*IEPLYNRFDEPNSWRLS 1
            E IEPLY+R+ EPNSWRLS
Sbjct: 1214 ERIEPLYDRYHEPNSWRLS 1232