BLASTX nr result

ID: Coptis25_contig00029637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029637
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514152.1| Grave disease carrier protein, putative [Ric...   187   2e-77
ref|XP_002279837.2| PREDICTED: graves disease carrier protein-li...   192   1e-75
ref|XP_004135701.1| PREDICTED: graves disease carrier protein ho...   179   1e-73
ref|XP_004168218.1| PREDICTED: LOW QUALITY PROTEIN: graves disea...   178   3e-73
ref|XP_002309234.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-72

>ref|XP_002514152.1| Grave disease carrier protein, putative [Ricinus communis]
           gi|223546608|gb|EEF48106.1| Grave disease carrier
           protein, putative [Ricinus communis]
          Length = 338

 Score =  187 bits (476), Expect(2) = 2e-77
 Identities = 91/116 (78%), Positives = 100/116 (86%)
 Frame = -3

Query: 350 RGNGASVARIVPYAALHYMMYEQYRRWIILGFPDIGRGPGLDLMAGSFSGGTAVLFTYPL 171
           RGNGASVARIVPYAALHYM YEQYRRWIIL +PDIGRGP LDL+AGSF+GGTAVLFTYPL
Sbjct: 82  RGNGASVARIVPYAALHYMTYEQYRRWIILSYPDIGRGPVLDLVAGSFAGGTAVLFTYPL 141

Query: 170 DLVRTKLAYQVFEPSKLNIKRMPHAEQFYKGIFDCFKKIHKESGIRGLYRGVAPSL 3
           DLVRTKLAYQV   SK+++  + + EQ Y+GI DCF K  KESG RGLYRGVAPSL
Sbjct: 142 DLVRTKLAYQVVNSSKMSMPAVVNTEQAYRGISDCFSKTFKESGFRGLYRGVAPSL 197



 Score =  128 bits (321), Expect(2) = 2e-77
 Identities = 63/79 (79%), Positives = 72/79 (91%)
 Frame = -2

Query: 660 EKREEREVVSVTDGMIESMPVFAKELVAGGVAGGFAKTVVAPLERVKILFQTRRADFHSI 481
           +KREERE+V   DG+I+SMPVFAKEL+AGGVAGGFAKTVVAPLERVKILFQTRR +F +I
Sbjct: 3   KKREEREMVMFLDGIIDSMPVFAKELIAGGVAGGFAKTVVAPLERVKILFQTRRDEFKAI 62

Query: 480 GLLGSFKKIANTEGILGFY 424
           GLLGS +KIA TEGI+GFY
Sbjct: 63  GLLGSIRKIAKTEGIMGFY 81


>ref|XP_002279837.2| PREDICTED: graves disease carrier protein-like [Vitis vinifera]
          Length = 341

 Score =  192 bits (488), Expect(2) = 1e-75
 Identities = 93/116 (80%), Positives = 102/116 (87%)
 Frame = -3

Query: 350 RGNGASVARIVPYAALHYMMYEQYRRWIILGFPDIGRGPGLDLMAGSFSGGTAVLFTYPL 171
           RGNGASVARIVPYAALHYM YEQYRRWIIL FPDI RGP LDLMAGSF+GGTAVLFTYPL
Sbjct: 82  RGNGASVARIVPYAALHYMAYEQYRRWIILNFPDIRRGPVLDLMAGSFAGGTAVLFTYPL 141

Query: 170 DLVRTKLAYQVFEPSKLNIKRMPHAEQFYKGIFDCFKKIHKESGIRGLYRGVAPSL 3
           DLVRTKLAYQV   +KLNIK + HAEQ Y+GI DCF K ++E+G+RGLYRG AP+L
Sbjct: 142 DLVRTKLAYQVVGSTKLNIKGIVHAEQAYRGILDCFSKTYREAGVRGLYRGGAPAL 197



 Score =  117 bits (294), Expect(2) = 1e-75
 Identities = 61/81 (75%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = -2

Query: 663 MEK-REEREVVSVTDGMIESMPVFAKELVAGGVAGGFAKTVVAPLERVKILFQTRRADFH 487
           MEK RE  E   + DG+ +SMPV+ KELVAGGVAGGFAKT+VAPLERVKILFQTR+A+F 
Sbjct: 1   MEKNREGGERGMLLDGLRDSMPVYVKELVAGGVAGGFAKTMVAPLERVKILFQTRKAEFQ 60

Query: 486 SIGLLGSFKKIANTEGILGFY 424
           SIGLLGSF+KIA TEG+LGFY
Sbjct: 61  SIGLLGSFRKIAKTEGVLGFY 81


>ref|XP_004135701.1| PREDICTED: graves disease carrier protein homolog [Cucumis sativus]
          Length = 341

 Score =  179 bits (455), Expect(2) = 1e-73
 Identities = 87/116 (75%), Positives = 97/116 (83%)
 Frame = -3

Query: 350 RGNGASVARIVPYAALHYMMYEQYRRWIILGFPDIGRGPGLDLMAGSFSGGTAVLFTYPL 171
           RGNGASVARIVPYAALHYM YEQYRRWIIL FP+  RGP LDL+AGSF+GGTAV+FTYPL
Sbjct: 82  RGNGASVARIVPYAALHYMAYEQYRRWIILSFPNFNRGPVLDLLAGSFAGGTAVIFTYPL 141

Query: 170 DLVRTKLAYQVFEPSKLNIKRMPHAEQFYKGIFDCFKKIHKESGIRGLYRGVAPSL 3
           DLVRTKLA+QV  PSK +I  +   E  Y+GI DCF K  KE+G+RGLYRGVAPSL
Sbjct: 142 DLVRTKLAFQVVAPSKSSIHGLVVPEHVYRGISDCFSKTFKEAGLRGLYRGVAPSL 197



 Score =  123 bits (309), Expect(2) = 1e-73
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = -2

Query: 660 EKREEREVVSVTDGMIESMPVFAKELVAGGVAGGFAKTVVAPLERVKILFQTRRADFHSI 481
           +KR+EREV  + DG+IESMP +AKELVAGG+AGG AKTVVAPLERVKILFQTRRA++ SI
Sbjct: 3   KKRDEREVGMIMDGVIESMPQYAKELVAGGLAGGIAKTVVAPLERVKILFQTRRAEYQSI 62

Query: 480 GLLGSFKKIANTEGILGFY 424
           GLLGS KKI+ TEG LGFY
Sbjct: 63  GLLGSIKKISKTEGFLGFY 81


>ref|XP_004168218.1| PREDICTED: LOW QUALITY PROTEIN: graves disease carrier protein
           homolog [Cucumis sativus]
          Length = 341

 Score =  178 bits (452), Expect(2) = 3e-73
 Identities = 87/116 (75%), Positives = 96/116 (82%)
 Frame = -3

Query: 350 RGNGASVARIVPYAALHYMMYEQYRRWIILGFPDIGRGPGLDLMAGSFSGGTAVLFTYPL 171
           RGNGASVARIVPYAALHYM YEQYRRWIIL FP+  RGP LDL AGSF+GGTAV+FTYPL
Sbjct: 82  RGNGASVARIVPYAALHYMAYEQYRRWIILSFPNFNRGPVLDLXAGSFAGGTAVIFTYPL 141

Query: 170 DLVRTKLAYQVFEPSKLNIKRMPHAEQFYKGIFDCFKKIHKESGIRGLYRGVAPSL 3
           DLVRTKLA+QV  PSK +I  +   E  Y+GI DCF K  KE+G+RGLYRGVAPSL
Sbjct: 142 DLVRTKLAFQVVAPSKSSIHGLVVPEHVYRGISDCFSKTFKEAGLRGLYRGVAPSL 197



 Score =  123 bits (309), Expect(2) = 3e-73
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = -2

Query: 660 EKREEREVVSVTDGMIESMPVFAKELVAGGVAGGFAKTVVAPLERVKILFQTRRADFHSI 481
           +KR+EREV  + DG+IESMP +AKELVAGG+AGG AKTVVAPLERVKILFQTRRA++ SI
Sbjct: 3   KKRDEREVGMIMDGVIESMPQYAKELVAGGLAGGIAKTVVAPLERVKILFQTRRAEYQSI 62

Query: 480 GLLGSFKKIANTEGILGFY 424
           GLLGS KKI+ TEG LGFY
Sbjct: 63  GLLGSIKKISKTEGFLGFY 81


>ref|XP_002309234.1| predicted protein [Populus trichocarpa] gi|222855210|gb|EEE92757.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  184 bits (468), Expect(2) = 9e-72
 Identities = 92/116 (79%), Positives = 97/116 (83%)
 Frame = -3

Query: 350 RGNGASVARIVPYAALHYMMYEQYRRWIILGFPDIGRGPGLDLMAGSFSGGTAVLFTYPL 171
           RGNGASVARIVPYAALHYM YEQYRRWIIL FPDIGRGP LDL+AGSF+GGTAVL TYPL
Sbjct: 73  RGNGASVARIVPYAALHYMTYEQYRRWIILSFPDIGRGPVLDLVAGSFAGGTAVLLTYPL 132

Query: 170 DLVRTKLAYQVFEPSKLNIKRMPHAEQFYKGIFDCFKKIHKESGIRGLYRGVAPSL 3
           DLVRTKLAYQ+   SK NI  +   E  YKGI DCF K  KESG+RGLYRGVAPSL
Sbjct: 133 DLVRTKLAYQIVSSSKANINGVIGMELVYKGIRDCFSKTLKESGLRGLYRGVAPSL 188



 Score =  112 bits (280), Expect(2) = 9e-72
 Identities = 55/67 (82%), Positives = 62/67 (92%)
 Frame = -2

Query: 624 DGMIESMPVFAKELVAGGVAGGFAKTVVAPLERVKILFQTRRADFHSIGLLGSFKKIANT 445
           D +IE+MPVFAKELVAGGVAGGFAKTVVAPLERVKILFQTRR +F S+GL GSFKKI++T
Sbjct: 6   DEIIEAMPVFAKELVAGGVAGGFAKTVVAPLERVKILFQTRRDEFKSVGLFGSFKKISHT 65

Query: 444 EGILGFY 424
           EGI+G Y
Sbjct: 66  EGIMGLY 72


Top