BLASTX nr result

ID: Coptis25_contig00029632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029632
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509827.1| conserved hypothetical protein [Ricinus comm...    66   3e-09
gb|EAY89659.1| hypothetical protein OsI_11190 [Oryza sativa Indi...    62   5e-08
ref|XP_004155711.1| PREDICTED: uncharacterized protein LOC101230...    61   1e-07
ref|XP_002515332.1| conserved hypothetical protein [Ricinus comm...    61   1e-07
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002509827.1| conserved hypothetical protein [Ricinus communis]
           gi|223549726|gb|EEF51214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
 Frame = +3

Query: 183 DWNDNGNLL--KTPKLEFLLFDGTNPRVWARKCNQFFHLHPMDDKKKINIASLYFEGRAN 356
           +WN +   +  + PK+E   F+G NPR+W +KC ++F L+ + +++KI+IASLY   RA+
Sbjct: 96  NWNSSFGSMGGRIPKVELSHFEGNNPRLWIKKCEKYFQLYSIPNEQKIDIASLYLGDRAD 155

Query: 357 SWFLTYQDGKELVDWNALVE 416
            W+  +Q      DW    E
Sbjct: 156 IWYQGWQAQTRSSDWGKFSE 175


>gb|EAY89659.1| hypothetical protein OsI_11190 [Oryza sativa Indica Group]
          Length = 244

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/77 (36%), Positives = 42/77 (54%)
 Frame = +3

Query: 192 DNGNLLKTPKLEFLLFDGTNPRVWARKCNQFFHLHPMDDKKKINIASLYFEGRANSWFLT 371
           D+G   +  KL+F  F GT PR+W  KC ++F  + M  K  ++ AS++ EG A  W +T
Sbjct: 64  DSGGFFRLAKLKFPTFSGTFPRLWITKCTRYFEFYGMPMKMWVSWASMHMEGMAELWMMT 123

Query: 372 YQDGKELVDWNALVEVI 422
           Y+   E  DW    E +
Sbjct: 124 YEKRHER-DWGRFCEAV 139


>ref|XP_004155711.1| PREDICTED: uncharacterized protein LOC101230021 [Cucumis sativus]
          Length = 1480

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
 Frame = +3

Query: 117  TPLETTTEAEQSTTYS---RQKISNDWNDNGNLLKTPKLEFLLFDGTNPRVWARKCNQFF 287
            TP++   + E S+      +++I  + + NG+  K  K+E L+F+G +P  W     ++F
Sbjct: 964  TPMKNNDDGEGSSIRENEPKEEIKTNEDTNGDRNKFKKVEMLVFNGDDPDSWLFCTERYF 1023

Query: 288  HLHPMDDKKKINIASLYFEGRANSWFLTYQDGKELVDWNALVE 416
             +H + D  K+ +A++ FEG A +W+ + ++  + VDW  L E
Sbjct: 1024 QIHKLTDFVKMIVATISFEGPALNWYRSQEERDKFVDWANLKE 1066


>ref|XP_002515332.1| conserved hypothetical protein [Ricinus communis]
           gi|223545812|gb|EEF47316.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/66 (40%), Positives = 41/66 (62%)
 Frame = +3

Query: 216 PKLEFLLFDGTNPRVWARKCNQFFHLHPMDDKKKINIASLYFEGRANSWFLTYQDGKELV 395
           PKL+F  FDG+N R W +KC ++F    + DK+K+++ASL    +A +W  +Y   +  V
Sbjct: 33  PKLKFPKFDGSNLRQWIKKCCKYFVFCKIPDKQKVDLASLNMVDKAENWVSSYLINRTAV 92

Query: 396 DWNALV 413
           DWN  V
Sbjct: 93  DWNDFV 98


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +3

Query: 216 PKLEFLLFDGTNPRVWARKCNQFFHLHPMDDKKKINIASLYFEGRANSWFLTYQDGKE-L 392
           P+++   F G NPR W R+C +FF L+    ++ + +ASLY EG+A  WF  Y  G E +
Sbjct: 53  PRMDLTTFWGDNPRGWLRRCKKFFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEGV 112

Query: 393 VDW 401
           VDW
Sbjct: 113 VDW 115


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