BLASTX nr result

ID: Coptis25_contig00029625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029625
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19500.3| unnamed protein product [Vitis vinifera]               64   1e-17
emb|CAN60788.1| hypothetical protein VITISV_034534 [Vitis vinifera]    64   1e-17
ref|XP_002282856.1| PREDICTED: subtilisin-like protease-like [Vi...    64   1e-17
ref|XP_002326946.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-17
ref|XP_002282333.1| PREDICTED: subtilisin-like protease [Vitis v...    53   1e-14

>emb|CBI19500.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score = 64.3 bits (155), Expect(2) = 1e-17
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 197 AMNPGLIYDIGFKDYVEFLCNLGYTDQQMSVVIKKNLWTC*DNASDL 57
           AM+PGLI+D+  +DYVEFLC LGYT +QMS ++++N W C    +DL
Sbjct: 617 AMDPGLIFDMDLQDYVEFLCGLGYTRKQMSAILRRNQWNCSGKPNDL 663



 Score = 50.4 bits (119), Expect(2) = 1e-17
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = -2

Query: 309 MTTAYATDNTH*TIRDSWTGLSATTLNFGAGHVNPHISYEP 187
           MTTA   DN     RD WTGL A+ L+FGAGH+NP+ + +P
Sbjct: 580 MTTANTIDNIGSAFRDQWTGLPASPLDFGAGHINPNKAMDP 620


>emb|CAN60788.1| hypothetical protein VITISV_034534 [Vitis vinifera]
          Length = 766

 Score = 64.3 bits (155), Expect(2) = 1e-17
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 197 AMNPGLIYDIGFKDYVEFLCNLGYTDQQMSVVIKKNLWTC*DNASDL 57
           AM+PGLI+D+  +DYVEFLC LGYT +QMS ++++N W C    +DL
Sbjct: 617 AMDPGLIFDMDLQDYVEFLCGLGYTRKQMSAILRRNQWNCSGKPNDL 663



 Score = 50.4 bits (119), Expect(2) = 1e-17
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = -2

Query: 309 MTTAYATDNTH*TIRDSWTGLSATTLNFGAGHVNPHISYEP 187
           MTTA   DN     RD WTGL A+ L+FGAGH+NP+ + +P
Sbjct: 580 MTTANTIDNIGSAFRDQWTGLPASPLDFGAGHINPNKAMDP 620


>ref|XP_002282856.1| PREDICTED: subtilisin-like protease-like [Vitis vinifera]
          Length = 736

 Score = 64.3 bits (155), Expect(2) = 1e-17
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -3

Query: 197 AMNPGLIYDIGFKDYVEFLCNLGYTDQQMSVVIKKNLWTC*DNASDL 57
           AM+PGLI+D+  +DYVEFLC LGYT +QMS ++++N W C    +DL
Sbjct: 587 AMDPGLIFDMDLQDYVEFLCGLGYTRKQMSAILRRNQWNCSGKPNDL 633



 Score = 50.4 bits (119), Expect(2) = 1e-17
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = -2

Query: 309 MTTAYATDNTH*TIRDSWTGLSATTLNFGAGHVNPHISYEP 187
           MTTA   DN     RD WTGL A+ L+FGAGH+NP+ + +P
Sbjct: 550 MTTANTIDNIGSAFRDQWTGLPASPLDFGAGHINPNKAMDP 590


>ref|XP_002326946.1| predicted protein [Populus trichocarpa] gi|222835261|gb|EEE73696.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 65.1 bits (157), Expect(2) = 2e-17
 Identities = 27/47 (57%), Positives = 36/47 (76%)
 Frame = -3

Query: 197 AMNPGLIYDIGFKDYVEFLCNLGYTDQQMSVVIKKNLWTC*DNASDL 57
           AM+PGLIYD+  +DYV FLC LGYT +QMS V+++N W+C    +DL
Sbjct: 612 AMDPGLIYDMNVQDYVNFLCGLGYTAKQMSAVLRRNQWSCSQEPTDL 658



 Score = 48.5 bits (114), Expect(2) = 2e-17
 Identities = 21/41 (51%), Positives = 29/41 (70%)
 Frame = -2

Query: 309 MTTAYATDNTH*TIRDSWTGLSATTLNFGAGHVNPHISYEP 187
           MTTAY  DNT  T+++    L AT L+FGAGH+NP+ + +P
Sbjct: 575 MTTAYTKDNTRTTMKNQMINLPATPLDFGAGHINPNKAMDP 615


>ref|XP_002282333.1| PREDICTED: subtilisin-like protease [Vitis vinifera]
          Length = 765

 Score = 53.1 bits (126), Expect(2) = 1e-14
 Identities = 20/40 (50%), Positives = 31/40 (77%)
 Frame = -3

Query: 197 AMNPGLIYDIGFKDYVEFLCNLGYTDQQMSVVIKKNLWTC 78
           AM+PGLIYDI  +DY+ FLC L YT +Q+ ++ +++ +TC
Sbjct: 610 AMDPGLIYDIEVQDYINFLCGLNYTSKQIKIISRRSKFTC 649



 Score = 50.8 bits (120), Expect(2) = 1e-14
 Identities = 23/41 (56%), Positives = 32/41 (78%)
 Frame = -2

Query: 309 MTTAYATDNTH*TIRDSWTGLSATTLNFGAGHVNPHISYEP 187
           MTTAY  DNT  +I D  TG++AT L+FGAGH+NP+++ +P
Sbjct: 573 MTTAYLLDNTIGSIIDMDTGVAATPLDFGAGHINPNMAMDP 613


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