BLASTX nr result

ID: Coptis25_contig00029617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029617
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40742.3| unnamed protein product [Vitis vinifera]              381   e-104
ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   381   e-104
ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, ...   380   e-103
gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]              343   2e-92
ref|XP_002307804.1| predicted protein [Populus trichocarpa] gi|2...   285   9e-75

>emb|CBI40742.3| unnamed protein product [Vitis vinifera]
          Length = 485

 Score =  381 bits (979), Expect = e-104
 Identities = 172/215 (80%), Positives = 187/215 (86%)
 Frame = +2

Query: 2   SAINALGFGNRTVEITISESGWPSKGDPEDIAATPDNAKTYNTRLIEKGDSHKGTPMRPK 181
           SAINALGFGNRT+EIT+SESGWPSKG+  D AATP+NAK YNTRLIE+G S KGTPMRPK
Sbjct: 271 SAINALGFGNRTIEITVSESGWPSKGEAGDSAATPENAKKYNTRLIERGQSDKGTPMRPK 330

Query: 182 DTIEVFVFALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALG 361
           D +EVFVFALFNENKK G VSERNFG+ NGDGSKVYE+DL+CKFCS  G   GFGEK   
Sbjct: 331 DKVEVFVFALFNENKKGGGVSERNFGILNGDGSKVYEIDLSCKFCSGNGGAVGFGEKVAN 390

Query: 362 SLRGPSVWCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQGACFDPNKLHAHASYAMNG 541
           + RGPSVWCVAKPHADEKVLQAVLDFCCG GGV+C+E+   G CF+PNKLHAH+SYAMN 
Sbjct: 391 AARGPSVWCVAKPHADEKVLQAVLDFCCGPGGVDCREIYGSGDCFEPNKLHAHSSYAMNA 450

Query: 542 YYQMHGRNYWNCDFKGTGLVTFSDPSYGTCRYPQQ 646
           YYQMHGRNYWNCDFKG GLVTF DPSYG CRYPQQ
Sbjct: 451 YYQMHGRNYWNCDFKGAGLVTFGDPSYGRCRYPQQ 485


>ref|XP_002272900.1| PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Vitis vinifera]
           gi|147832741|emb|CAN72608.1| hypothetical protein
           VITISV_021340 [Vitis vinifera]
          Length = 460

 Score =  381 bits (979), Expect = e-104
 Identities = 172/215 (80%), Positives = 187/215 (86%)
 Frame = +2

Query: 2   SAINALGFGNRTVEITISESGWPSKGDPEDIAATPDNAKTYNTRLIEKGDSHKGTPMRPK 181
           SAINALGFGNRT+EIT+SESGWPSKG+  D AATP+NAK YNTRLIE+G S KGTPMRPK
Sbjct: 246 SAINALGFGNRTIEITVSESGWPSKGEAGDSAATPENAKKYNTRLIERGQSDKGTPMRPK 305

Query: 182 DTIEVFVFALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALG 361
           D +EVFVFALFNENKK G VSERNFG+ NGDGSKVYE+DL+CKFCS  G   GFGEK   
Sbjct: 306 DKVEVFVFALFNENKKGGGVSERNFGILNGDGSKVYEIDLSCKFCSGNGGAVGFGEKVAN 365

Query: 362 SLRGPSVWCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQGACFDPNKLHAHASYAMNG 541
           + RGPSVWCVAKPHADEKVLQAVLDFCCG GGV+C+E+   G CF+PNKLHAH+SYAMN 
Sbjct: 366 AARGPSVWCVAKPHADEKVLQAVLDFCCGPGGVDCREIYGSGDCFEPNKLHAHSSYAMNA 425

Query: 542 YYQMHGRNYWNCDFKGTGLVTFSDPSYGTCRYPQQ 646
           YYQMHGRNYWNCDFKG GLVTF DPSYG CRYPQQ
Sbjct: 426 YYQMHGRNYWNCDFKGAGLVTFGDPSYGRCRYPQQ 460


>ref|XP_002510704.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis] gi|223551405|gb|EEF52891.1| Glucan
           endo-1,3-beta-glucosidase precursor, putative [Ricinus
           communis]
          Length = 458

 Score =  380 bits (975), Expect = e-103
 Identities = 172/215 (80%), Positives = 191/215 (88%)
 Frame = +2

Query: 2   SAINALGFGNRTVEITISESGWPSKGDPEDIAATPDNAKTYNTRLIEKGDSHKGTPMRPK 181
           SA+N+LGFGN+T++IT+SESGWPSKGDP D AATPD A+TYNTRLIE+  S+KGTPM+PK
Sbjct: 245 SAVNSLGFGNQTIDITVSESGWPSKGDPGDTAATPDIARTYNTRLIERAQSNKGTPMKPK 304

Query: 182 DTIEVFVFALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALG 361
           D IE++VFALFNENKK G VSERNFG+FNGDGSKVYEVDL+C+FCSNGG  F FGEK   
Sbjct: 305 DNIEIYVFALFNENKKGGDVSERNFGIFNGDGSKVYEVDLSCQFCSNGGT-FEFGEKVSS 363

Query: 362 SLRGPSVWCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQGACFDPNKLHAHASYAMNG 541
             RGPSVWCVAKPHADEKVLQAVLDFCCG GGV+C+E+   G CF P+KLHAHASYAMN 
Sbjct: 364 GARGPSVWCVAKPHADEKVLQAVLDFCCGPGGVDCREIYESGDCFAPDKLHAHASYAMNA 423

Query: 542 YYQMHGRNYWNCDFKGTGLVTFSDPSYGTCRYPQQ 646
           YYQMHGRNYWNCDFKGTGLVTFSDPSYG CRYPQQ
Sbjct: 424 YYQMHGRNYWNCDFKGTGLVTFSDPSYGKCRYPQQ 458


>gb|AFU52645.1| beta-1,3-glucanase 10 [Solanum tuberosum]
          Length = 456

 Score =  343 bits (880), Expect = 2e-92
 Identities = 160/216 (74%), Positives = 185/216 (85%), Gaps = 1/216 (0%)
 Frame = +2

Query: 2   SAINALGFGNRTVEITISESGWPSKGDPEDIAATPDNAKTYNTRLIEKGDSHKGTPMRPK 181
           SAINALG+GNRT++I +SESGWPSKGD    +AT +NA+TYNTRLIE+  S+KGTPM PK
Sbjct: 246 SAINALGYGNRTIQIVVSESGWPSKGDA---SATNENARTYNTRLIERAQSNKGTPMNPK 302

Query: 182 DTIEVFVFALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFG-EKAL 358
           D I+VFVFALFNENKK+G +SERNFG+FNGDG+KVY+VDL+C+FCSN  EKFG   E +L
Sbjct: 303 DRIDVFVFALFNENKKQGGISERNFGIFNGDGTKVYDVDLSCEFCSN--EKFGGKIESSL 360

Query: 359 GSLRGPSVWCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQGACFDPNKLHAHASYAMN 538
              RGPSVWCVAKPHADEKV+QAVLDFCCG GGV+C+E+   G CF P+K++AHASYAMN
Sbjct: 361 LKSRGPSVWCVAKPHADEKVIQAVLDFCCGPGGVDCREIDENGDCFQPDKVYAHASYAMN 420

Query: 539 GYYQMHGRNYWNCDFKGTGLVTFSDPSYGTCRYPQQ 646
            YYQMHGRNYWNCDFKGTGLVTFSDPSYG C Y  Q
Sbjct: 421 AYYQMHGRNYWNCDFKGTGLVTFSDPSYGKCFYSHQ 456


>ref|XP_002307804.1| predicted protein [Populus trichocarpa] gi|222857253|gb|EEE94800.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  285 bits (728), Expect = 9e-75
 Identities = 141/207 (68%), Positives = 157/207 (75%)
 Frame = +2

Query: 2   SAINALGFGNRTVEITISESGWPSKGDPEDIAATPDNAKTYNTRLIEKGDSHKGTPMRPK 181
           SAI ALG GNRTV+ITISESGWPSKG+  + AATPDNAKT+NTRL+E+  S KGTPM PK
Sbjct: 11  SAIVALGSGNRTVKITISESGWPSKGESGETAATPDNAKTHNTRLVERAQSSKGTPMSPK 70

Query: 182 DTIEVFVFALFNENKKEGSVSERNFGLFNGDGSKVYEVDLTCKFCSNGGEKFGFGEKALG 361
           + I+ FVFALFNENKKEG VSER+FG+ NG  S                   GFGEK   
Sbjct: 71  ENIQKFVFALFNENKKEGGVSERSFGISNGGTS-------------------GFGEKMSS 111

Query: 362 SLRGPSVWCVAKPHADEKVLQAVLDFCCGTGGVNCKELINQGACFDPNKLHAHASYAMNG 541
            + GPSV CVAKPHADEKVLQAVLD  CG GGV+C+E+   G CF P+KLHAHASYAMN 
Sbjct: 112 GVSGPSVRCVAKPHADEKVLQAVLDLFCGPGGVDCREIYVSGDCFAPDKLHAHASYAMNA 171

Query: 542 YYQMHGRNYWNCDFKGTGLVTFSDPSY 622
           YYQMHGRN+WNCDFKGTGLVTFSD SY
Sbjct: 172 YYQMHGRNHWNCDFKGTGLVTFSDRSY 198


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