BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029609
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    78   7e-13
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    69   3e-10
emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]    66   3e-09
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    64   1e-08
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 58/181 (32%), Positives = 89/181 (49%), Gaps = 32/181 (17%)
 Frame = -1

Query: 452 VSKVVLTSMYPNDPSKDCIAVAIYSLRMKIAIARPGDKTWITIQN-IFSVKDIIYFKEKL 276
           ++KVVL+S  P+  + +C+ +AI+S   K+A  +PGDK WIT+++     KD++Y+K+  
Sbjct: 147 LNKVVLSST-PSPSNANCVIMAIHSNYNKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNF 205

Query: 275 YGITPNNNLCICDIKSDP---PKASEMHVSYSSLTGVFNRYLVEWSGELLQVIR------ 123
           Y I   + +  CDI  DP   P A    + Y        RYLVE SG LL V+R      
Sbjct: 206 YAI-GRSKVVQCDIGDDPRVIPFALLPKMGYFQY-----RYLVESSGCLLYVLRYMDLKD 259

Query: 122 -------------------QESRKRFC---TTSRIDVFKFDFAWNKWRLVETLGEYALFL 9
                                 +++F     T+   V+ FDF   KW+L++ + E AL L
Sbjct: 260 NEDPLKLRYETTGFKVFDLDSDKRKFSYRYETTTFKVYNFDFDQKKWKLIKNIKEKALLL 319

Query: 8   G 6
           G
Sbjct: 320 G 320


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
 Frame = -1

Query: 452 VSKVVLTSMYPNDPSKD--CIAVAIYSLRMKIAIARPGDKTWITIQNIFSV-KDIIYFKE 282
           + KVVL+S     P KD   + +AI +    +A  R GDK+W  ++N  S  +D+I+   
Sbjct: 165 IRKVVLSS----SPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNG 220

Query: 281 KLYGITPNNNLCICDIKSDPPKASEMHVSYSSLTGVFNRYLVEWSGELLQVIRQESRKR- 105
             Y +     + ICDI SD P+ S M     +  G   +YLV    ELL V R    +  
Sbjct: 221 MFYAVNKAGQIVICDISSDSPRVSFMETPRQA--GGDMQYLVNSGDELLLVTRYLDLEYE 278

Query: 104 ----------FCTTSRIDVFKFDFAWNKWRLVETLGEYALFLG 6
                        T R +VF+ D+   +W  + TLG+ ALF+G
Sbjct: 279 FDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIG 321


>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
 Frame = -1

Query: 452 VSKVVLTSMYPNDPSKDCIAVAIYSLRMKIAIARPGDKTWITIQN-IFSVKDIIYFKEKL 276
           ++KVVL+S  P+  + +C+ +AI+S   K+A  +PGDK WIT+++     KD++Y+K+  
Sbjct: 147 LNKVVLSST-PSPSNANCVIMAIHSNYKKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNF 205

Query: 275 YGITPNNNLCICDIKSDP---PKASEMHVSYSSLTGVFNRYLVEWSGELLQVIR 123
           Y I   + +  CDI  DP   P A    + Y        RYLVE SG LL V+R
Sbjct: 206 YAI-GRSKVVQCDIGDDPRVIPFALLPKMGYFQY-----RYLVESSGCLLYVLR 253


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
 Frame = -1

Query: 452 VSKVVLTSMYPNDPSKDCIAVAIYSLRMKIAIARPGDKTWITIQNIFS-VKDIIYFKEKL 276
           + K +L+S   N    D IAV I +    +A+ R  D +W  +++  S  +D+I+ +   
Sbjct: 162 IKKTILSSSPAN--GSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLF 219

Query: 275 YGITPNNNLCICDIKSDPPKASEMHVSYSSLTGVFNRYLVEWSGELLQVIRQ-------- 120
           Y +    ++ +CD+    P+ S + +      G   +YLVE   ELL V R         
Sbjct: 220 YAVNKYGSIAVCDVSGSSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVE 277

Query: 119 -ESRKRFCTTSRIDVFKFDFAWNKWRLVETLGEYALFLG 6
            +       T+R  V + D    +W +V +LG+ ALFLG
Sbjct: 278 PDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLG 316


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
 Frame = -1

Query: 452 VSKVVLTSMYPNDPSKDCIAVAIYSLRMKIAIARPGDKTWITIQNIFSV-KDIIYFKEKL 276
           + KVV++S          +A+AI      +A  + GD+ W  ++N  S  +D+IYF    
Sbjct: 164 IKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLF 223

Query: 275 YGITPNNNLCICDIKSDPPKASEMHVSYSSLTGVFNRYLVEWSGELLQVIRQ-----ESR 111
           Y +     + +CD+  + PK S   +      G   +YLV     LL V R      E  
Sbjct: 224 YAVNKAGQIVVCDVNGNSPKVS--FIETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFD 281

Query: 110 KRFCTTSRIDVFKFDFAWNKWRLVETLGEYALFLG 6
                T+R +VFK D    +W  V +LG+  LF+G
Sbjct: 282 IFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIG 316