BLASTX nr result

ID: Coptis25_contig00029596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029596
         (1167 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281069.1| PREDICTED: glucose-1-phosphate adenylyltrans...   553   e-155
ref|XP_002517196.1| glucose-1-phosphate adenylyltransferase, put...   550   e-154
ref|NP_001241391.1| uncharacterized protein LOC100810451 [Glycin...   539   e-151
ref|XP_003549968.1| PREDICTED: glucose-1-phosphate adenylyltrans...   536   e-150
ref|XP_002311802.1| predicted protein [Populus trichocarpa] gi|2...   535   e-150

>ref|XP_002281069.1| PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1,
            chloroplastic [Vitis vinifera]
          Length = 520

 Score =  553 bits (1424), Expect = e-155
 Identities = 282/355 (79%), Positives = 311/355 (87%), Gaps = 6/355 (1%)
 Frame = -3

Query: 1048 MALPMDGGISLST------TTGLAGRNGRLGKFSNGELMGKKLLNLSQLHHSKASGNSNG 887
            MA+  D  ISLS       TTGLAGR+ R  KF NGE+MGKKL  ++QL   +    S G
Sbjct: 1    MAVSTDARISLSAAGQLHGTTGLAGRSLRQVKFCNGEMMGKKL-KMTQLGMFR--NKSVG 57

Query: 886  RFVCMSVLTNNVAAETKXXXXXXXXXDPRTVAAIILGGGAGTRLFPLTKRRAKPAVPIGG 707
            + VCMS+ T+ VAA++K         DPRTV A+ILGGGAGTRLFPLTKRRAKPAVPIGG
Sbjct: 58   KHVCMSLATD-VAADSKLRDLEMEKRDPRTVVAVILGGGAGTRLFPLTKRRAKPAVPIGG 116

Query: 706  AYRLIDVPMSNCINSGINKIYILTQYNSASLNRHLARAYNFGNGISFGDGFVEALAATQT 527
            +YRLIDVPMSNCINSGINK+YILTQ+NSASLNRHLARAYNFG+G++FGDG+VEALAATQT
Sbjct: 117  SYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGHGVNFGDGYVEALAATQT 176

Query: 526  PGEMGKQWFQGTADAVRQFHWLFEDARSREIEDIIILSGDHLYRMDYMDFIQNHRESGAD 347
            PGE GK+WFQGTADAVRQFHWLFED RS+EIED++ILSGDHLYRMDYMDF+QNHR+SGAD
Sbjct: 177  PGEAGKRWFQGTADAVRQFHWLFEDQRSKEIEDVLILSGDHLYRMDYMDFVQNHRQSGAD 236

Query: 346  ITLSCLPMDDSRASDFGLMKIDSKGRVLSFSEKPKGNNLKAMEVDTTVLGLSREEAKKKP 167
            IT+SCLPMDDSRASDFGLMKID+KGRVL FSEKPKG +LKAMEVDT VLGLSREEA+KKP
Sbjct: 237  ITISCLPMDDSRASDFGLMKIDNKGRVLFFSEKPKGEDLKAMEVDTKVLGLSREEAEKKP 296

Query: 166  YIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASANEFFIKAYLFNDYWEDI 2
            YIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASA EFFIKAYLFNDYWEDI
Sbjct: 297  YIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASAKEFFIKAYLFNDYWEDI 351


>ref|XP_002517196.1| glucose-1-phosphate adenylyltransferase, putative [Ricinus communis]
            gi|223543831|gb|EEF45359.1| glucose-1-phosphate
            adenylyltransferase, putative [Ricinus communis]
          Length = 533

 Score =  550 bits (1418), Expect = e-154
 Identities = 281/358 (78%), Positives = 309/358 (86%), Gaps = 8/358 (2%)
 Frame = -3

Query: 1051 KMALPMDGGISLSTTTGLAG-RNGRLGKFSNGELMGKKLLNLSQLHH----SKASGNSNG 887
            + +L + GG       GLAG RN RL KF NGELMG KL  L+QLH     + +S +S+G
Sbjct: 8    RFSLSVAGGQLHGGAAGLAGGRNIRLVKFGNGELMGSKL-KLTQLHQRASTTSSSNSSSG 66

Query: 886  RFVCMSV---LTNNVAAETKXXXXXXXXXDPRTVAAIILGGGAGTRLFPLTKRRAKPAVP 716
            + V   V   LT N+AA+ K         DPRTV AIILGGGAGTRLFPLTKRRAKPAVP
Sbjct: 67   KVVKQHVSMSLTTNIAADYKLRDLEMEKRDPRTVVAIILGGGAGTRLFPLTKRRAKPAVP 126

Query: 715  IGGAYRLIDVPMSNCINSGINKIYILTQYNSASLNRHLARAYNFGNGISFGDGFVEALAA 536
            IGGAYRLIDVPMSNCINSGINK+YILTQ+NSASLNRHLARAYNFGNGI+FGDGFVE LAA
Sbjct: 127  IGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHLARAYNFGNGINFGDGFVEVLAA 186

Query: 535  TQTPGEMGKQWFQGTADAVRQFHWLFEDARSREIEDIIILSGDHLYRMDYMDFIQNHRES 356
            TQTPGE GK+WFQGTADAVRQFHWLFEDARS++I+D+++LSGDHLYRMDYMDF+QNHR+S
Sbjct: 187  TQTPGEAGKRWFQGTADAVRQFHWLFEDARSKDIDDVLVLSGDHLYRMDYMDFVQNHRQS 246

Query: 355  GADITLSCLPMDDSRASDFGLMKIDSKGRVLSFSEKPKGNNLKAMEVDTTVLGLSREEAK 176
            GADIT+SCLPMDDSRASDFGLM ID+KGRVLSFSEKPKG +LKAM VDTTVLGLS+EEA+
Sbjct: 247  GADITISCLPMDDSRASDFGLMNIDNKGRVLSFSEKPKGADLKAMAVDTTVLGLSKEEAE 306

Query: 175  KKPYIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASANEFFIKAYLFNDYWEDI 2
            KKPYIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASA EFFIKAYLFNDYWEDI
Sbjct: 307  KKPYIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASAKEFFIKAYLFNDYWEDI 364


>ref|NP_001241391.1| uncharacterized protein LOC100810451 [Glycine max]
            gi|255639628|gb|ACU20108.1| unknown [Glycine max]
          Length = 520

 Score =  539 bits (1388), Expect = e-151
 Identities = 271/353 (76%), Positives = 303/353 (85%), Gaps = 4/353 (1%)
 Frame = -3

Query: 1048 MALPMDGGISLSTTTGLAG----RNGRLGKFSNGELMGKKLLNLSQLHHSKASGNSNGRF 881
            MA    G I+LS+T  L G    RN +L KF NGE+MG+KLL L     S        + 
Sbjct: 1    MAASAGGQITLSSTVQLHGVTCNRNWKLVKFCNGEVMGRKLL-LKNGGGSTKDFKRQQQH 59

Query: 880  VCMSVLTNNVAAETKXXXXXXXXXDPRTVAAIILGGGAGTRLFPLTKRRAKPAVPIGGAY 701
            +CMS LT +V+ E+K         +PRTV A+ILGGGAGTRLFPLTKRRAKPAVPIGGAY
Sbjct: 60   ICMS-LTADVSTESKLRDLDMERRNPRTVLAVILGGGAGTRLFPLTKRRAKPAVPIGGAY 118

Query: 700  RLIDVPMSNCINSGINKIYILTQYNSASLNRHLARAYNFGNGISFGDGFVEALAATQTPG 521
            RLIDVPMSNCINSGINK+YILTQ+NSASLNRH+ARAYN GNG++FGDG+VE LAATQTPG
Sbjct: 119  RLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNSGNGVTFGDGYVEVLAATQTPG 178

Query: 520  EMGKQWFQGTADAVRQFHWLFEDARSREIEDIIILSGDHLYRMDYMDFIQNHRESGADIT 341
            E GK+WFQGTADAVRQFHWLFED RS++IED++ILSGDHLYRMDYMDF+QNHRESGADIT
Sbjct: 179  EAGKKWFQGTADAVRQFHWLFEDPRSKDIEDVLILSGDHLYRMDYMDFVQNHRESGADIT 238

Query: 340  LSCLPMDDSRASDFGLMKIDSKGRVLSFSEKPKGNNLKAMEVDTTVLGLSREEAKKKPYI 161
            LSCLPMDDSRASDFGLMKID+KGRVLSFSEKPKG  LKAM+VDTTVLGLS++EA+KKPYI
Sbjct: 239  LSCLPMDDSRASDFGLMKIDNKGRVLSFSEKPKGEELKAMQVDTTVLGLSKDEAQKKPYI 298

Query: 160  ASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASANEFFIKAYLFNDYWEDI 2
            ASMGVYVFKKEILLNLLRWRFPTANDFGSE+IPASA EF++KAYLFNDYWEDI
Sbjct: 299  ASMGVYVFKKEILLNLLRWRFPTANDFGSEVIPASAREFYMKAYLFNDYWEDI 351


>ref|XP_003549968.1| PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1,
            chloroplastic-like [Glycine max]
          Length = 523

 Score =  536 bits (1380), Expect = e-150
 Identities = 268/355 (75%), Positives = 304/355 (85%), Gaps = 6/355 (1%)
 Frame = -3

Query: 1048 MALPMDGGISLSTTTGLAG----RNGRLGKFSNGELMGKKLLNLSQLHHSKAS--GNSNG 887
            MA    G I+LS+T  L G    RN +L KF NGE+MG+KL+  S    S      +   
Sbjct: 1    MAASAGGQITLSSTVQLHGVACSRNWKLVKFCNGEVMGRKLVLKSAYGGSTKDVRHHQQQ 60

Query: 886  RFVCMSVLTNNVAAETKXXXXXXXXXDPRTVAAIILGGGAGTRLFPLTKRRAKPAVPIGG 707
            + +CMS LT +V+ E+K         +PRTV A+ILGGGAGTRLFPLTKRRAKPAVPIGG
Sbjct: 61   QHICMS-LTADVSTESKLRDLDMERRNPRTVLAVILGGGAGTRLFPLTKRRAKPAVPIGG 119

Query: 706  AYRLIDVPMSNCINSGINKIYILTQYNSASLNRHLARAYNFGNGISFGDGFVEALAATQT 527
            AYRLIDVPMSNCINSGINK+YILTQ+NSASLNRH+ARAYN GNG++FGDG+VE LAATQT
Sbjct: 120  AYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNSGNGVTFGDGYVEVLAATQT 179

Query: 526  PGEMGKQWFQGTADAVRQFHWLFEDARSREIEDIIILSGDHLYRMDYMDFIQNHRESGAD 347
            PGE GK+WFQGTADAVRQFHWLFED RS++IED++ILSGDHLYRMDYMDF+QNHRESGAD
Sbjct: 180  PGEAGKKWFQGTADAVRQFHWLFEDPRSKDIEDVLILSGDHLYRMDYMDFVQNHRESGAD 239

Query: 346  ITLSCLPMDDSRASDFGLMKIDSKGRVLSFSEKPKGNNLKAMEVDTTVLGLSREEAKKKP 167
            ITLSCLPMDDSRASDFGLM+ID+KGR+LSFSEKPKG  LKAM+VDTTVLGLS++EA+KKP
Sbjct: 240  ITLSCLPMDDSRASDFGLMRIDNKGRILSFSEKPKGEELKAMQVDTTVLGLSKDEAQKKP 299

Query: 166  YIASMGVYVFKKEILLNLLRWRFPTANDFGSEIIPASANEFFIKAYLFNDYWEDI 2
            YIASMGVYVFKKEILLNLLRWRFPTANDFGSE+IPASA EF++KAYLFNDYWEDI
Sbjct: 300  YIASMGVYVFKKEILLNLLRWRFPTANDFGSEVIPASAREFYMKAYLFNDYWEDI 354


>ref|XP_002311802.1| predicted protein [Populus trichocarpa] gi|222851622|gb|EEE89169.1|
            predicted protein [Populus trichocarpa]
          Length = 528

 Score =  535 bits (1379), Expect = e-150
 Identities = 271/329 (82%), Positives = 292/329 (88%), Gaps = 2/329 (0%)
 Frame = -3

Query: 982  RLGKFSNGELMGKKLLNLSQLHH--SKASGNSNGRFVCMSVLTNNVAAETKXXXXXXXXX 809
            RL KF NGELMG KL  L+QLH   S  +     + VCMS LT +VA E++         
Sbjct: 33   RLVKFGNGELMGNKL-KLNQLHQGTSTLAVRIPKQQVCMS-LTTDVAMESRLRDLEMEKR 90

Query: 808  DPRTVAAIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKIYILTQY 629
            DPRTV A+ILGGGAGTRLFPLTKRRAKPAVPIGG+YRLIDVPMSNCINSGINK+YILTQY
Sbjct: 91   DPRTVVAVILGGGAGTRLFPLTKRRAKPAVPIGGSYRLIDVPMSNCINSGINKVYILTQY 150

Query: 628  NSASLNRHLARAYNFGNGISFGDGFVEALAATQTPGEMGKQWFQGTADAVRQFHWLFEDA 449
            NSASLNRHLARAYN GNG+SFGDGFVEALAATQTPGE GK+WFQGTADAVRQFHWLFE  
Sbjct: 151  NSASLNRHLARAYNLGNGVSFGDGFVEALAATQTPGEAGKKWFQGTADAVRQFHWLFEGP 210

Query: 448  RSREIEDIIILSGDHLYRMDYMDFIQNHRESGADITLSCLPMDDSRASDFGLMKIDSKGR 269
            RS+EIED++ILSGDHLYRMDYMDF+QNHR+ GADITLSCLPMDDSRASDFGLMKID+KGR
Sbjct: 211  RSKEIEDVLILSGDHLYRMDYMDFVQNHRQGGADITLSCLPMDDSRASDFGLMKIDNKGR 270

Query: 268  VLSFSEKPKGNNLKAMEVDTTVLGLSREEAKKKPYIASMGVYVFKKEILLNLLRWRFPTA 89
            VLSFSEKPKG +LKAMEVDTTVLGLS+EEA KKPYIASMGVYVFKKEILLNLLRWRFPTA
Sbjct: 271  VLSFSEKPKGVDLKAMEVDTTVLGLSKEEALKKPYIASMGVYVFKKEILLNLLRWRFPTA 330

Query: 88   NDFGSEIIPASANEFFIKAYLFNDYWEDI 2
            NDFGSEIIPASA EF++KAYLFNDYWEDI
Sbjct: 331  NDFGSEIIPASAKEFYMKAYLFNDYWEDI 359


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