BLASTX nr result
ID: Coptis25_contig00029584
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00029584 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002881310.1| hypothetical protein ARALYDRAFT_902473 [Arab... 74 1e-11 ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 ref|NP_001078002.1| uncharacterized protein [Arabidopsis thalian... 74 1e-11 gb|ABK28329.1| unknown [Arabidopsis thaliana] 74 1e-11 ref|NP_001078001.1| uncharacterized protein [Arabidopsis thalian... 74 1e-11 >ref|XP_002881310.1| hypothetical protein ARALYDRAFT_902473 [Arabidopsis lyrata subsp. lyrata] gi|297327149|gb|EFH57569.1| hypothetical protein ARALYDRAFT_902473 [Arabidopsis lyrata subsp. lyrata] Length = 99 Score = 74.3 bits (181), Expect = 1e-11 Identities = 38/71 (53%), Positives = 49/71 (69%) Frame = +1 Query: 46 SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225 S ARS +RS R+ S+ S F+LPKQ+PL++ IFRSPVELSC +E++L Sbjct: 2 STARSVLRSGVSRAVVAALRSTKPTPYSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61 Query: 226 PFHTATASALL 258 P+HTATASALL Sbjct: 62 PYHTATASALL 72 >ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|222870897|gb|EEF08028.1| predicted protein [Populus trichocarpa] Length = 98 Score = 74.3 bits (181), Expect = 1e-11 Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 2/75 (2%) Frame = +1 Query: 40 ATSCARSFIRSSTFRSXXXXXXXXXXXXRS--SASPFRLPKQTPLTNPIFRSPVELSCAM 213 AT+ ARSF+RS+ R+ S ++SPFR+ K++PL++ IFRSPVE+SC + Sbjct: 3 ATAAARSFLRSTATRTSAAARLASAPKPGSKPASSPFRISKESPLSHRIFRSPVEMSCCV 62 Query: 214 ESLLPFHTATASALL 258 E++LP+HTATASALL Sbjct: 63 ETMLPYHTATASALL 77 >ref|NP_001078002.1| uncharacterized protein [Arabidopsis thaliana] gi|330253803|gb|AEC08897.1| uncharacterized protein [Arabidopsis thaliana] Length = 89 Score = 73.9 bits (180), Expect = 1e-11 Identities = 38/71 (53%), Positives = 48/71 (67%) Frame = +1 Query: 46 SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225 S ARS RS R+ S+ S F+LPKQ+PL++ IFRSPVELSC +E++L Sbjct: 2 SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61 Query: 226 PFHTATASALL 258 P+HTATASALL Sbjct: 62 PYHTATASALL 72 >gb|ABK28329.1| unknown [Arabidopsis thaliana] Length = 94 Score = 73.9 bits (180), Expect = 1e-11 Identities = 38/71 (53%), Positives = 48/71 (67%) Frame = +1 Query: 46 SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225 S ARS RS R+ S+ S F+LPKQ+PL++ IFRSPVELSC +E++L Sbjct: 2 SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61 Query: 226 PFHTATASALL 258 P+HTATASALL Sbjct: 62 PYHTATASALL 72 >ref|NP_001078001.1| uncharacterized protein [Arabidopsis thaliana] gi|98961761|gb|ABF59210.1| unknown protein [Arabidopsis thaliana] gi|330253802|gb|AEC08896.1| uncharacterized protein [Arabidopsis thaliana] Length = 93 Score = 73.9 bits (180), Expect = 1e-11 Identities = 38/71 (53%), Positives = 48/71 (67%) Frame = +1 Query: 46 SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225 S ARS RS R+ S+ S F+LPKQ+PL++ IFRSPVELSC +E++L Sbjct: 2 SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61 Query: 226 PFHTATASALL 258 P+HTATASALL Sbjct: 62 PYHTATASALL 72