BLASTX nr result

ID: Coptis25_contig00029584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029584
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002881310.1| hypothetical protein ARALYDRAFT_902473 [Arab...    74   1e-11
ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|NP_001078002.1| uncharacterized protein [Arabidopsis thalian...    74   1e-11
gb|ABK28329.1| unknown [Arabidopsis thaliana]                          74   1e-11
ref|NP_001078001.1| uncharacterized protein [Arabidopsis thalian...    74   1e-11

>ref|XP_002881310.1| hypothetical protein ARALYDRAFT_902473 [Arabidopsis lyrata subsp.
           lyrata] gi|297327149|gb|EFH57569.1| hypothetical protein
           ARALYDRAFT_902473 [Arabidopsis lyrata subsp. lyrata]
          Length = 99

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = +1

Query: 46  SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225
           S ARS +RS   R+             S+ S F+LPKQ+PL++ IFRSPVELSC +E++L
Sbjct: 2   STARSVLRSGVSRAVVAALRSTKPTPYSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61

Query: 226 PFHTATASALL 258
           P+HTATASALL
Sbjct: 62  PYHTATASALL 72


>ref|XP_002329835.1| predicted protein [Populus trichocarpa] gi|222870897|gb|EEF08028.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/75 (50%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
 Frame = +1

Query: 40  ATSCARSFIRSSTFRSXXXXXXXXXXXXRS--SASPFRLPKQTPLTNPIFRSPVELSCAM 213
           AT+ ARSF+RS+  R+             S  ++SPFR+ K++PL++ IFRSPVE+SC +
Sbjct: 3   ATAAARSFLRSTATRTSAAARLASAPKPGSKPASSPFRISKESPLSHRIFRSPVEMSCCV 62

Query: 214 ESLLPFHTATASALL 258
           E++LP+HTATASALL
Sbjct: 63  ETMLPYHTATASALL 77


>ref|NP_001078002.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330253803|gb|AEC08897.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 89

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = +1

Query: 46  SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225
           S ARS  RS   R+             S+ S F+LPKQ+PL++ IFRSPVELSC +E++L
Sbjct: 2   SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61

Query: 226 PFHTATASALL 258
           P+HTATASALL
Sbjct: 62  PYHTATASALL 72


>gb|ABK28329.1| unknown [Arabidopsis thaliana]
          Length = 94

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = +1

Query: 46  SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225
           S ARS  RS   R+             S+ S F+LPKQ+PL++ IFRSPVELSC +E++L
Sbjct: 2   SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61

Query: 226 PFHTATASALL 258
           P+HTATASALL
Sbjct: 62  PYHTATASALL 72


>ref|NP_001078001.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98961761|gb|ABF59210.1| unknown protein [Arabidopsis
           thaliana] gi|330253802|gb|AEC08896.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 93

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/71 (53%), Positives = 48/71 (67%)
 Frame = +1

Query: 46  SCARSFIRSSTFRSXXXXXXXXXXXXRSSASPFRLPKQTPLTNPIFRSPVELSCAMESLL 225
           S ARS  RS   R+             S+ S F+LPKQ+PL++ IFRSPVELSC +E++L
Sbjct: 2   SAARSVFRSGVGRAAVAALRSTKPMPSSARSSFKLPKQSPLSHRIFRSPVELSCCVETML 61

Query: 226 PFHTATASALL 258
           P+HTATASALL
Sbjct: 62  PYHTATASALL 72


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