BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029567
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81356.1| hypothetical protein VITISV_039159 [Vitis vinifera]    63   2e-08
ref|XP_002316034.1| GRAS family transcription factor [Populus tr...    58   7e-07
ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vi...    57   1e-06
ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus commun...    57   2e-06

>emb|CAN81356.1| hypothetical protein VITISV_039159 [Vitis vinifera]
          Length = 404

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
 Frame = -1

Query: 280 EKGVLLS-----EDNQQQQPYSDFGMLDDFQYNILSPPFEAPEDSVTLDS-VLTELSDYI 119
           ++G LLS     ED QQ+Q + D+  LDD  ++++S P +  +D +   S   T + + +
Sbjct: 70  DEGFLLSKYQQQEDEQQKQSFLDYEFLDDLHFDVVSQPIQLCQDYMINPSRTPTGIPNLV 129

Query: 118 QPKNERSYPTTIASLELLNGYKSGFTKMNGERLNE 14
           +PK ++  P +  SLELL  Y+SG   +N E+LNE
Sbjct: 130 EPKKKKGCPFSSTSLELLKNYRSGIRLLNEEKLNE 164


>ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222865074|gb|EEF02205.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 588

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -1

Query: 250 QQQQPYSDFGMLDDFQYNILSPPFEAPEDSV-TLDSVLTELSDYIQPKNERSYPTTIASL 74
           Q+QQ Y D G+LDD  YNILSP  +   D +  LD +     D +QP  E  YP ++ASL
Sbjct: 71  QKQQSYLDCGLLDDHSYNILSPQLQTSLDGIEKLDEIPAVTQDGLQPWKENQYPFSLASL 130

Query: 73  ELLNGYKSGFTKMNGERLNEQ 11
           EL      G  + +GER  E+
Sbjct: 131 EL-----HGDRQFDGERTVER 146


>ref|XP_002270640.2| PREDICTED: DELLA protein GAI1-like [Vitis vinifera]
          Length = 616

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = -1

Query: 289 TVPEKGVLLSEDNQQQQ--PYSDFGMLDDFQYNILSPPFEAPEDSVTLDSVLTELSDYI- 119
           ++P+K    S+  QQQQ  P S+   LD+ Q++ +S P +  ++S  L+     + + + 
Sbjct: 73  SIPDKRAHFSKAQQQQQQSPRSNHWALDELQFDTVSTPIQPIQESKKLEDFQAGIKEPLH 132

Query: 118 QPKNERSYPTTIASLELLNGYKSGFTKMNGERLN 17
           +P  E+ YP +++SLELLN Y  G  K+  E L+
Sbjct: 133 EPNREKPYPFSLSSLELLNNYGGGVKKLKRENLS 166


>ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 594

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
 Frame = -1

Query: 280 EKGVLLS---EDNQQQQPYSDFGMLDDFQYNILSPPFEAPEDSVT-LDSVLTELSDYIQP 113
           E+ +L+S   + +QQQ  + D+  LDD ++ ILSPP +     +T LD + + + + ++ 
Sbjct: 59  EEELLMSKYDQQDQQQNSFGDYMHLDDLRFGILSPPLQKCYQEITQLDEIQSGIRE-VKS 117

Query: 112 KNERSYPTTIASLELLNGYKSGFTKMNGERLNE 14
           K E  Y   +ASLELL  + +GF ++N  R+ E
Sbjct: 118 KKENPYAFPLASLELLKSHTNGFNQLNSMRMLE 150