BLASTX nr result

ID: Coptis25_contig00029554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029554
         (1386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   357   3e-96
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   356   9e-96
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   355   1e-95
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]        353   6e-95
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   352   1e-94

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  357 bits (917), Expect = 3e-96
 Identities = 177/457 (38%), Positives = 273/457 (59%)
 Frame = +3

Query: 15   DVIPQLVSDEDNDCLLRPVQDSEVFEALNHMGSLKAPGPDGFQALFFKNYWNEVGPKVLD 194
            D  PQ+ +D D + ++RP+ + EV  AL  M   KAPGPDGFQ LF++ +W+ V P V+ 
Sbjct: 418  DFFPQITAD-DFEKMMRPLSEVEVTLALKSMKPFKAPGPDGFQPLFYQRFWDLVKPNVMH 476

Query: 195  LVQNFFNNGAFSKEINHTHIVLIPKTNNPISPDHFRPISLTNVVYKLISKILVNRMRPIL 374
            LV    +   F +  N T IVLIPK + P    HFRPI L N+VYK+++K+++NR++PIL
Sbjct: 477  LVSEILSGRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPIL 536

Query: 375  LKIISPHQSAFLPNRSFHDNALLTHEAFHTIRSKYNLKQNYFALKLDLQKAYDKLEWGFL 554
              +ISP Q +F+PNR   DN ++  E FH++R+K   K+ + A+K+D +KAYD+L W F+
Sbjct: 537  PSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQG-KKGFMAVKIDFEKAYDRLRWTFI 595

Query: 555  QKVLRAFGFDETFVRKIMFCVKSVSYSVLLNGSPFGYFYPTRGIRQGDPMSPYLFIICAE 734
            ++ L      +  V  +M CV S +  +L NG P     PTRG+RQGDP+SPYL++IC E
Sbjct: 596  RESLMELRIPQHLVDIVMNCVSSANLQILWNGEPMEKICPTRGLRQGDPLSPYLYVICME 655

Query: 735  VLSLKLLELQSNSDYDGIKLARNCQPLTHLMYADDIIIYGKTDLKQAVDINKVLEEYCVV 914
             L+  + +  +N ++  +K +RN  P+++L +ADD+I++ +  ++QA  +   L+ +C  
Sbjct: 656  RLAHLIDQEVTNGNWKPVKASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEA 715

Query: 915  AGQSINRSKSQFIHHKKLHPKFAKLMFKIFKVPTTHHFPSYLGVPSVLGRAHQDKFQPLV 1094
            +G  +N  KS+       H      +     +  T  F  YLGVP++ GR+ + ++Q LV
Sbjct: 716  SGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQYLV 775

Query: 1095 QRFRDRLAKWKTILLSKGGRLTLINSVLSALPSHIMSCIKLPYELIDQLDKYRRSFLWGH 1274
             R   +LA WKT  LS  GR TLI S  S++P + M   KLP    D +D+  RSFLWG 
Sbjct: 776  DRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGE 835

Query: 1275 DITERKMHYFSWDLACTPVSAGGLGVKNLDIHNLALL 1385
               +R++H  +W+        GGLG++++   N A L
Sbjct: 836  QEGKRRVHLVAWENISKSKKEGGLGIRSMRQANSAFL 872


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  356 bits (913), Expect = 9e-96
 Identities = 184/461 (39%), Positives = 274/461 (59%)
 Frame = +3

Query: 3    GSYFDVIPQLVSDEDNDCLLRPVQDSEVFEALNHMGSLKAPGPDGFQALFFKNYWNEVGP 182
            G   ++    ++DE N  L +P  D E+ +AL  +G LKAPGPDGF A FF+  W  +  
Sbjct: 658  GELLNMFEPKITDEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVLKR 717

Query: 183  KVLDLVQNFFNNGAFSKEINHTHIVLIPKTNNPISPDHFRPISLTNVVYKLISKILVNRM 362
             V++ V+ FF  G + + +N T IV+IPKTN P+    FRP+SL NV+YK+++K LVNR+
Sbjct: 718  DVIEGVREFFETGEWKEGMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNRL 777

Query: 363  RPILLKIISPHQSAFLPNRSFHDNALLTHEAFHTIRSKYNLKQNYFALKLDLQKAYDKLE 542
            RP+L +IIS  QSAF+P R   DNAL+  E FH+I       Q++ ALKLDL KAYD+++
Sbjct: 778  RPLLQEIISETQSAFVPGRMITDNALVAFECFHSIHKCTRESQDFCALKLDLSKAYDRVD 837

Query: 543  WGFLQKVLRAFGFDETFVRKIMFCVKSVSYSVLLNGSPFGYFYPTRGIRQGDPMSPYLFI 722
            WGFL   L+  GF   + + IM CV SV YSV LNG+    FYPTRG+R+GDP++PYLF+
Sbjct: 838  WGFLDGALQKLGFGNIWRKWIMSCVTSVRYSVRLNGNMLEPFYPTRGLREGDPLNPYLFL 897

Query: 723  ICAEVLSLKLLELQSNSDYDGIKLARNCQPLTHLMYADDIIIYGKTDLKQAVDINKVLEE 902
              A+ LS  L   +       +K+ R+   ++HL++ADD +++ K ++ QA  I + L+ 
Sbjct: 898  FIADGLSNILQRRRDERQIQPLKVCRSAPGVSHLLFADDSLLFFKAEVIQATRIKEALDL 957

Query: 903  YCVVAGQSINRSKSQFIHHKKLHPKFAKLMFKIFKVPTTHHFPSYLGVPSVLGRAHQDKF 1082
            Y    GQ IN  +   +       +    +  + +V  T      LG+P+  GR   ++F
Sbjct: 958  YERCTGQLINPKECSLLFSALCPQERQDGIKAVLQVERTCFDDKCLGLPTPDGRMKAEQF 1017

Query: 1083 QPLVQRFRDRLAKWKTILLSKGGRLTLINSVLSALPSHIMSCIKLPYELIDQLDKYRRSF 1262
            QP+ +RF  RL  W    LS  G+  LI SV  ALP++ M   K+P    ++ ++  R+F
Sbjct: 1018 QPIKERFEKRLTDWSERFLSLAGKEALIKSVAQALPTYTMGVFKMPERFCEEYEQLVRNF 1077

Query: 1263 LWGHDITERKMHYFSWDLACTPVSAGGLGVKNLDIHNLALL 1385
             WGH+  E+K+H+ +W+   +P   GGLG +++   N ALL
Sbjct: 1078 WWGHEKGEKKVHWIAWEKLTSPKLLGGLGFRDIRCFNQALL 1118


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  355 bits (912), Expect = 1e-95
 Identities = 179/459 (38%), Positives = 271/459 (59%), Gaps = 2/459 (0%)
 Frame = +3

Query: 15   DVIPQLVSDEDNDCLLRPVQDSEVFEALNHMGSLKAPGPDGFQALFFKNYWNEVGPKVLD 194
            +++   ++DE    L  P +  EV  AL  M   KAPGPDG  ALF++++W+ +G  V  
Sbjct: 419  NIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTT 478

Query: 195  LVQNFFNNGAFSKEINHTHIVLIPKTNNPISPDHFRPISLTNVVYKLISKILVNRMRPIL 374
             V N  NN      +N THIVLIPK  +  SP  FRPISL NV+YK+++K+L NRM+ +L
Sbjct: 479  KVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPVDFRPISLCNVLYKIVAKVLANRMKMVL 538

Query: 375  LKIISPHQSAFLPNRSFHDNALLTHEAFHTIRSKYNLKQNYFALKLDLQKAYDKLEWGFL 554
              +I   QS F+P R   DN L+ +E FH +R K   K+ Y  LKLD+ KAYD++EW FL
Sbjct: 539  PMVIHESQSGFVPGRLITDNVLVAYECFHFLRKKKTGKKGYLGLKLDMSKAYDRVEWCFL 598

Query: 555  QKVLRAFGFDETFVRKIMFCVKSVSYSVLLNGSPFGYFYPTRGIRQGDPMSPYLFIICAE 734
            + ++   GF   + + +M CV S  +SVL+NG P   F+P+RG+RQGDP+SP+LF++CAE
Sbjct: 599  ENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAE 658

Query: 735  VLSLKLLELQSNSDYDGIKLARNCQPLTHLMYADDIIIYGKTDLKQAVDINKVLEEYCVV 914
             LS  L + +      G+K+     P++HL +ADD +++ +   ++  ++  +L  Y   
Sbjct: 659  GLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAA 718

Query: 915  AGQSINRSKSQFIHHKKLHP-KFAKLMFKI-FKVPTTHHFPSYLGVPSVLGRAHQDKFQP 1088
            +GQ +N  KS+  + + L P K   L  K+ FK    H    YLG+P+ +G + +  FQ 
Sbjct: 719  SGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHE--KYLGLPTFIGSSKKRVFQA 776

Query: 1089 LVQRFRDRLAKWKTILLSKGGRLTLINSVLSALPSHIMSCIKLPYELIDQLDKYRRSFLW 1268
            +  R   +L  WK   LS+ GR  LI +V  A+P++ M C  +P  +ID ++K  R+F W
Sbjct: 777  IQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFW 836

Query: 1269 GHDITERKMHYFSWDLACTPVSAGGLGVKNLDIHNLALL 1385
            G    ER++ + +W+    P   GGLG++N D+ N ALL
Sbjct: 837  GQKEEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALL 875


>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
          Length = 1205

 Score =  353 bits (906), Expect = 6e-95
 Identities = 183/449 (40%), Positives = 269/449 (59%)
 Frame = +3

Query: 39   DEDNDCLLRPVQDSEVFEALNHMGSLKAPGPDGFQALFFKNYWNEVGPKVLDLVQNFFNN 218
            DE N  L +P  D E+ +AL  +G LKAPGPDGF A FF+  W  +   V++ V+ FF  
Sbjct: 406  DEMNGMLTKPFTDEEISDALFQIGPLKAPGPDGFPARFFQRNWGVLKRDVIEGVREFFET 465

Query: 219  GAFSKEINHTHIVLIPKTNNPISPDHFRPISLTNVVYKLISKILVNRMRPILLKIISPHQ 398
            G + + +N T IV+IPKTN P+    FRP+SL NV+YK+++K LVNR+RP+L +IIS  Q
Sbjct: 466  GEWKEGMNDTVIVMIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQ 525

Query: 399  SAFLPNRSFHDNALLTHEAFHTIRSKYNLKQNYFALKLDLQKAYDKLEWGFLQKVLRAFG 578
            SAF+P R   DNAL+  E FH+I       Q++ ALKLDL KAYD+++WGFL   L+  G
Sbjct: 526  SAFVPGRMITDNALVAFECFHSIHKCTRESQDFCALKLDLSKAYDRVDWGFLDGALQKLG 585

Query: 579  FDETFVRKIMFCVKSVSYSVLLNGSPFGYFYPTRGIRQGDPMSPYLFIICAEVLSLKLLE 758
            F   + + IM CV SV YSV LNG+    FYPTRG+R+GDP++PYLF+  A+ LS  L  
Sbjct: 586  FGNIWRKWIMSCVTSVRYSVRLNGNMLEPFYPTRGLREGDPLNPYLFLFIADGLSNILQR 645

Query: 759  LQSNSDYDGIKLARNCQPLTHLMYADDIIIYGKTDLKQAVDINKVLEEYCVVAGQSINRS 938
             +       +K+ R+   ++HL++ADD +++ K ++ QA  I + L+ Y    GQ IN  
Sbjct: 646  RRDERQIQPLKVCRSAPGVSHLLFADDSLLFFKAEVIQATRIKEALDLYERCTGQLINPK 705

Query: 939  KSQFIHHKKLHPKFAKLMFKIFKVPTTHHFPSYLGVPSVLGRAHQDKFQPLVQRFRDRLA 1118
            +   +       +    +  + +V  T      LG+P+  GR   ++FQP+ +RF  RL 
Sbjct: 706  ECSLLFSALCPQERQDGIKAVLQVERTCFDDKCLGLPTPDGRMKAEQFQPIKERFEKRLT 765

Query: 1119 KWKTILLSKGGRLTLINSVLSALPSHIMSCIKLPYELIDQLDKYRRSFLWGHDITERKMH 1298
             W    LS  G+  LI SV  ALP++ M   K+P    ++ ++  R+F WGH+  E+K+H
Sbjct: 766  DWSERFLSLAGKEALIKSVAQALPTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVH 825

Query: 1299 YFSWDLACTPVSAGGLGVKNLDIHNLALL 1385
            + +W+   +P   GGLG +++   N ALL
Sbjct: 826  WIAWEKLTSPKLLGGLGFRDIRCFNQALL 854


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  352 bits (903), Expect = 1e-94
 Identities = 174/455 (38%), Positives = 276/455 (60%)
 Frame = +3

Query: 21   IPQLVSDEDNDCLLRPVQDSEVFEALNHMGSLKAPGPDGFQALFFKNYWNEVGPKVLDLV 200
            + + V+ E ND LL+P    E+F AL+ M   KAPGPDG  A+F++ +W+ +G +V + V
Sbjct: 419  VKRSVTQEYNDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFV 478

Query: 201  QNFFNNGAFSKEINHTHIVLIPKTNNPISPDHFRPISLTNVVYKLISKILVNRMRPILLK 380
             +  +N +    +N T+I LIPK  +P     FRPISL NV+YK+ SK +V R++  L  
Sbjct: 479  SSILHNYSCPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVLYKIASKAIVLRLKRFLPC 538

Query: 381  IISPHQSAFLPNRSFHDNALLTHEAFHTIRSKYNLKQNYFALKLDLQKAYDKLEWGFLQK 560
            I + +QSAF+P R   DN+L+  E FHT++ + N ++   A+KLD+ KAYD++EWGFL+K
Sbjct: 539  IATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRK 598

Query: 561  VLRAFGFDETFVRKIMFCVKSVSYSVLLNGSPFGYFYPTRGIRQGDPMSPYLFIICAEVL 740
            +L   GFD  +V  +M CV +VSYS ++NG   G   P+RG+RQGDP+SP+LFI+ A+  
Sbjct: 599  LLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAF 658

Query: 741  SLKLLELQSNSDYDGIKLARNCQPLTHLMYADDIIIYGKTDLKQAVDINKVLEEYCVVAG 920
            S  + +   + +  G K +RN   ++HL++ADD +++ +   ++ + I  +L +Y   +G
Sbjct: 659  SQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASG 718

Query: 921  QSINRSKSQFIHHKKLHPKFAKLMFKIFKVPTTHHFPSYLGVPSVLGRAHQDKFQPLVQR 1100
            Q IN  KS+    + +  +  + +  +  +        YLG+P++ GR+ +  F+ L+ R
Sbjct: 719  QKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDR 778

Query: 1101 FRDRLAKWKTILLSKGGRLTLINSVLSALPSHIMSCIKLPYELIDQLDKYRRSFLWGHDI 1280
               +L  WK  LLS+ G+  LI +V+ ALP+++M   KLP  +I ++      F WG   
Sbjct: 779  MWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKG 838

Query: 1281 TERKMHYFSWDLACTPVSAGGLGVKNLDIHNLALL 1385
             ERKMH+ SW+  C P   GG+G K+L + N ALL
Sbjct: 839  DERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALL 873


Top