BLASTX nr result

ID: Coptis25_contig00029553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029553
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271628.1| PREDICTED: uncharacterized protein LOC100244...    62   6e-08
emb|CBI37154.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002271767.1| PREDICTED: uncharacterized protein LOC100251...    61   1e-07
ref|XP_002271799.2| PREDICTED: uncharacterized protein LOC100246...    60   1e-07
emb|CBI37155.3| unnamed protein product [Vitis vinifera]               59   3e-07

>ref|XP_002271628.1| PREDICTED: uncharacterized protein LOC100244540 [Vitis vinifera]
          Length = 401

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/48 (62%), Positives = 35/48 (72%)
 Frame = -2

Query: 148 KCTENDCSSSFTVSYLENSCGLSTEAAIKAAKKVHFESTTNPDSVLKL 5
           +C  +    SFTVSYL NSCGLSTE+AI  +KKV FE+  NPDSVL L
Sbjct: 39  RCFSSSKQHSFTVSYLINSCGLSTESAISTSKKVQFENPKNPDSVLTL 86


>emb|CBI37154.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/46 (63%), Positives = 34/46 (73%)
 Frame = -2

Query: 142 TENDCSSSFTVSYLENSCGLSTEAAIKAAKKVHFESTTNPDSVLKL 5
           T  +   SFTVSYL NSCGLS E AI A++K+HFE+  NPDSVL L
Sbjct: 366 TGRELKHSFTVSYLVNSCGLSPETAISASEKIHFENPKNPDSVLAL 411


>ref|XP_002271767.1| PREDICTED: uncharacterized protein LOC100251440 [Vitis vinifera]
          Length = 478

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = -2

Query: 148 KCTENDCSSSFTVSYLENSCGLSTEAAIKAAKKVHFESTTNPDSVLKL 5
           +C       SFTVSYL NSCGLS E AI A++K+HFE+  NPDSVL L
Sbjct: 104 RCFSASNQHSFTVSYLVNSCGLSPETAISASEKIHFENPKNPDSVLAL 151


>ref|XP_002271799.2| PREDICTED: uncharacterized protein LOC100246295 [Vitis vinifera]
          Length = 387

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -2

Query: 148 KCTENDCSSSFTVSYLENSCGLSTEAAIKAAKKVHFESTTNPDSVLKL 5
           +C       SFTVSYL NSCGLS E AI A+ K+HFE+  NPDSVL L
Sbjct: 37  RCFSTSNKHSFTVSYLVNSCGLSPETAISASGKIHFENPKNPDSVLAL 84


>emb|CBI37155.3| unnamed protein product [Vitis vinifera]
          Length = 885

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -2

Query: 148 KCTENDCSSSFTVSYLENSCGLSTEAAIKAAKKVHFESTTNPDSVLKL 5
           +C  +    SFTVSYL NSCGLS E AI  +KKV FE+  NPDSVL L
Sbjct: 443 RCFSSSKQHSFTVSYLMNSCGLSPETAISTSKKVQFENPENPDSVLAL 490



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -2

Query: 121 SFTVSYLENSCGLSTEAAIKAAKKVHFESTTNPDSVLKL 5
           SFTVSYL NSCGLS E AI A+ K+HFE+  NPDS+L L
Sbjct: 71  SFTVSYLVNSCGLSPETAISASGKIHFENPKNPDSILAL 109


Top