BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029551
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   223   2e-56
ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thali...   205   6e-51
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   202   4e-50
ref|XP_003598665.1| Integrator complex subunit [Medicago truncat...   202   4e-50
ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arab...   201   6e-50

>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  223 bits (568), Expect = 2e-56
 Identities = 113/204 (55%), Positives = 156/204 (76%), Gaps = 6/204 (2%)
 Frame = -2

Query: 597 CIQKFKTLKYAEEACYNDTFVIKAFSSGLEIGASSWTLNGPRRSITYLPSS-FESAHAMS 421
           C+QK  TLKYA+E CYN T +IKA SSGLEIG  +WT+NGP+R+I  L SS F S+HAM+
Sbjct: 283 CMQKVHTLKYAQEVCYNGTLIIKAVSSGLEIGTCNWTINGPKRNIACLSSSIFNSSHAMN 342

Query: 420 FNYNSLRGNDLIMFSDLSSLQGGMVGTGDDVSKTSQDNETIATVKLENEEK-----IISS 256
           F+Y++LRGNDLI++SDLSS    +    D+   ++  ++  +T+  +N+++     ++S+
Sbjct: 343 FDYHALRGNDLIIYSDLSSPV--LEDVKDNSCYSAPTSQKSSTLSADNDQEASAELLLST 400

Query: 255 CETFEEREKIAFVCSCAIDSLKQGGSVLIPFARIGIVLQLLEEISVYLESSNLEVPIFMI 76
            E+ EE EK+ F+CSC IDS+K GGSVLIP  R+GI+LQLLE IS+ LE+S+L+VPIF+I
Sbjct: 401 SESLEEMEKLNFICSCIIDSVKAGGSVLIPIGRLGIILQLLELISLSLEASSLKVPIFII 460

Query: 75  STVAEELLAYANIVPEWLCNQCQE 4
           S+VAEELLA+ NI+PEWLC Q QE
Sbjct: 461 SSVAEELLAFTNIIPEWLCKQRQE 484


>ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
           gi|332641036|gb|AEE74557.1| integrator complex subunit 9
           [Arabidopsis thaliana]
          Length = 699

 Score =  205 bits (521), Expect = 6e-51
 Identities = 105/199 (52%), Positives = 144/199 (72%), Gaps = 1/199 (0%)
 Frame = -2

Query: 597 CIQKFKTLKYAEEACYNDTFVIKAFSSGLEIGASSWTLNGPRRSITYLPSS-FESAHAMS 421
           C++K + +K+AEE CYN T +IKA SSGL+IGA +W +NGP  S++Y+  S F S HA S
Sbjct: 208 CMKKVQGVKFAEEVCYNGTLIIKALSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARS 267

Query: 420 FNYNSLRGNDLIMFSDLSSLQGGMVGTGDDVSKTSQDNETIATVKLENEEKIISSCETFE 241
           F+++ L+  D++++SD SSLQ   V T D       DN  I+T+  +N++ ++++ ++ E
Sbjct: 268 FDFHGLKETDVLIYSDFSSLQSAEV-TEDGCISPDSDNNYISTIS-DNKDSLLNTEDSLE 325

Query: 240 EREKIAFVCSCAIDSLKQGGSVLIPFARIGIVLQLLEEISVYLESSNLEVPIFMISTVAE 61
           E EK+AFVCSCA +S   GGS LI   RIGIVLQLLE +S  LESS+L+VPIF+IS+VAE
Sbjct: 326 EMEKLAFVCSCAAESADAGGSTLITITRIGIVLQLLELLSNSLESSSLKVPIFVISSVAE 385

Query: 60  ELLAYANIVPEWLCNQCQE 4
           ELLAY N +PEWLC Q QE
Sbjct: 386 ELLAYTNTIPEWLCEQRQE 404


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  202 bits (514), Expect = 4e-50
 Identities = 102/209 (48%), Positives = 146/209 (69%), Gaps = 10/209 (4%)
 Frame = -2

Query: 600 DCIQKFKTLKYAEEACYNDTFVIKAFSSGLEIGASSWTLNGPRRSITYLPSS-FESAHAM 424
           DC+QK + LKYAE ACYN   VIKAFSSG+EIG+ +W + GP+ ++ ++ SS F S HAM
Sbjct: 210 DCMQKIEMLKYAEAACYNGELVIKAFSSGIEIGSCNWLIEGPKENMAWVSSSIFLSTHAM 269

Query: 423 SFNYNSLRGNDLIMFSDLSSL---------QGGMVGTGDDVSKTSQDNETIATVKLENEE 271
            F+Y++LRG DLI++SD SS          +   V    ++S  S D +       E  +
Sbjct: 270 EFDYHALRGTDLILYSDFSSQDVIEDVEQHESYFVSANHNLSSLSADGDNWK----ELND 325

Query: 270 KIISSCETFEEREKIAFVCSCAIDSLKQGGSVLIPFARIGIVLQLLEEISVYLESSNLEV 91
            ++S+ E+ EE +K+AF+CSC + S+K GGSVL+P  R+GI++QLLE+IS++LESS ++V
Sbjct: 326 CLLSNDESIEESDKLAFLCSCVVGSVKAGGSVLVPLNRLGIIMQLLEQISIFLESSAIKV 385

Query: 90  PIFMISTVAEELLAYANIVPEWLCNQCQE 4
           PI++IS+VA ELLA+ NI+PEWLC   QE
Sbjct: 386 PIYVISSVAAELLAFTNIIPEWLCKFRQE 414


>ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula]
           gi|355487713|gb|AES68916.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 536

 Score =  202 bits (514), Expect = 4e-50
 Identities = 107/201 (53%), Positives = 144/201 (71%), Gaps = 2/201 (0%)
 Frame = -2

Query: 600 DCIQKFKTLKYAEEACYNDTFVIKAFSSGLEIGASSWTLNGPRRSITYLPSS-FESAHAM 424
           D IQK  TL YA+EACYN T VIKAFSSG+EIG+S+WTLNGP+  I YL SS F SAHAM
Sbjct: 14  DSIQKINTLNYAQEACYNGTLVIKAFSSGVEIGSSNWTLNGPKGDIAYLSSSCFFSAHAM 73

Query: 423 SFNYNSLRGNDLIMFSDLSSLQGGM-VGTGDDVSKTSQDNETIATVKLENEEKIISSCET 247
           +F+Y+SL+    +++SD SSL     V  GD+ +  + D     + + +++   + S   
Sbjct: 74  AFDYSSLQRTSTLIYSDFSSLIDAQDVEDGDNYTDPTSDKLLPPSFE-DSDGFSLDSDVN 132

Query: 246 FEEREKIAFVCSCAIDSLKQGGSVLIPFARIGIVLQLLEEISVYLESSNLEVPIFMISTV 67
            +E+EK+ F+CSCAI+ +K GGSVLIP  R+G +LQLLEE++  LE+S +EVPI++IS+V
Sbjct: 133 LDEKEKLVFICSCAIECVKDGGSVLIPINRLGTILQLLEEMATLLEASAMEVPIYIISSV 192

Query: 66  AEELLAYANIVPEWLCNQCQE 4
           AEELLA  NI+PEWL  Q QE
Sbjct: 193 AEELLALLNIIPEWLSKQRQE 213


>ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
           lyrata] gi|297328374|gb|EFH58793.1| hypothetical protein
           ARALYDRAFT_896920 [Arabidopsis lyrata subsp. lyrata]
          Length = 699

 Score =  201 bits (512), Expect = 6e-50
 Identities = 102/199 (51%), Positives = 143/199 (71%), Gaps = 1/199 (0%)
 Frame = -2

Query: 597 CIQKFKTLKYAEEACYNDTFVIKAFSSGLEIGASSWTLNGPRRSITYLPSS-FESAHAMS 421
           C++K + +K+AEE CYN T +IKA SSGL+IGA +W +NGP  S++Y+  S F S HA +
Sbjct: 208 CMKKVQAVKFAEEVCYNGTLIIKALSSGLDIGACNWLINGPNGSLSYVSDSIFVSHHARN 267

Query: 420 FNYNSLRGNDLIMFSDLSSLQGGMVGTGDDVSKTSQDNETIATVKLENEEKIISSCETFE 241
           F+++ L+G D++++SD SSLQ   V     +S    DN  I+T   +N++ ++++ ++ E
Sbjct: 268 FDFHGLKGTDVLIYSDFSSLQSAEVTENGCISP-DPDNNYISTTS-DNKDSLLNTEDSLE 325

Query: 240 EREKIAFVCSCAIDSLKQGGSVLIPFARIGIVLQLLEEISVYLESSNLEVPIFMISTVAE 61
           E EK+ F+CSCA +S   GGS LI   RIGIVLQLLE +S  LESS+L+VPIF+IS+VAE
Sbjct: 326 EMEKLEFICSCAAESADAGGSTLITITRIGIVLQLLELMSNSLESSSLKVPIFVISSVAE 385

Query: 60  ELLAYANIVPEWLCNQCQE 4
           ELLAY N +PEWLC Q QE
Sbjct: 386 ELLAYTNTIPEWLCEQQQE 404