BLASTX nr result

ID: Coptis25_contig00029533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029533
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...   164   9e-39
ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...   162   3e-38
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   158   4e-37
ref|XP_003567367.1| PREDICTED: ABC transporter C family member 3...   157   9e-37
dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa ...   156   1e-36

>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score =  164 bits (414), Expect = 9e-39
 Identities = 77/105 (73%), Positives = 87/105 (82%)
 Frame = -1

Query: 317  WYQAYYINAARELARMAGTSKSPIVHHFSESITGAATIRCFNQEARFFAKIQMLIDDYSR 138
            WYQAYYI  ARELARM G  K+PI+HHFSESI GAATIRCFNQE  FF K++ LIDDYSR
Sbjct: 1038 WYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEKLFFTKVKALIDDYSR 1097

Query: 137  LTFYSSATMEWLSVRINFLFNLVFLSALLILVTLPREAVDPSMAG 3
            + F++  TMEWLSVRINFLFNLVF   L+ILVTLPR  +DPS+AG
Sbjct: 1098 VAFHNFGTMEWLSVRINFLFNLVFYFVLVILVTLPRSTIDPSLAG 1142


>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/105 (73%), Positives = 86/105 (81%)
 Frame = -1

Query: 317  WYQAYYINAARELARMAGTSKSPIVHHFSESITGAATIRCFNQEARFFAKIQMLIDDYSR 138
            WYQAYYI  ARELARM G  K+PI+HHFSESI GAATIRCFNQE  F  KI+ LIDDYSR
Sbjct: 1040 WYQAYYITTARELARMVGIRKAPILHHFSESIAGAATIRCFNQEKLFMTKIKALIDDYSR 1099

Query: 137  LTFYSSATMEWLSVRINFLFNLVFLSALLILVTLPREAVDPSMAG 3
            + F++  TMEWLSVRINFLFNLVF   L+ILVTLPR  +DPS+AG
Sbjct: 1100 VAFHNFGTMEWLSVRINFLFNLVFYFVLVILVTLPRSTIDPSLAG 1144


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  158 bits (400), Expect = 4e-37
 Identities = 74/105 (70%), Positives = 85/105 (80%)
 Frame = -1

Query: 317  WYQAYYINAARELARMAGTSKSPIVHHFSESITGAATIRCFNQEARFFAKIQMLIDDYSR 138
            WYQAYYI  ARELARM G  K+PI+HHFSESITGAATIRCFNQE RF  +   LIDDYSR
Sbjct: 955  WYQAYYITTARELARMVGIRKAPILHHFSESITGAATIRCFNQEERFLMRSLSLIDDYSR 1014

Query: 137  LTFYSSATMEWLSVRINFLFNLVFLSALLILVTLPREAVDPSMAG 3
            + F++S TMEWL +RINFLFNL F   L+ILV LP+ A+DPS+AG
Sbjct: 1015 IVFHNSGTMEWLCIRINFLFNLGFFLVLIILVNLPKSAIDPSLAG 1059


>ref|XP_003567367.1| PREDICTED: ABC transporter C family member 3-like [Brachypodium
            distachyon]
          Length = 1502

 Score =  157 bits (397), Expect = 9e-37
 Identities = 71/105 (67%), Positives = 90/105 (85%)
 Frame = -1

Query: 317  WYQAYYINAARELARMAGTSKSPIVHHFSESITGAATIRCFNQEARFFAKIQMLIDDYSR 138
            WYQ YYI++ARELARM G  K+P++HHFSE+++GAATIRCFNQ  +F AK   LIDDY+R
Sbjct: 1087 WYQGYYISSARELARMVGIRKAPVLHHFSETVSGAATIRCFNQGEKFLAKSFALIDDYTR 1146

Query: 137  LTFYSSATMEWLSVRINFLFNLVFLSALLILVTLPREAVDPSMAG 3
            +TF++SAT+EWLS+RINFLFNLVF   L+ILV LPR+ +DPS+AG
Sbjct: 1147 VTFHNSATVEWLSIRINFLFNLVFFVMLVILVLLPRDTIDPSLAG 1191


>dbj|BAB90531.1| putative MRP-like ABC transporter [Oryza sativa Japonica Group]
            gi|27368889|emb|CAD59602.1| MRP-like ABC transporter
            [Oryza sativa Japonica Group]
          Length = 1386

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/105 (67%), Positives = 89/105 (84%)
 Frame = -1

Query: 317  WYQAYYINAARELARMAGTSKSPIVHHFSESITGAATIRCFNQEARFFAKIQMLIDDYSR 138
            WYQ+YYI +ARELARM G  K+P++HHFSE+++GAATIRCFNQ  +FF K   LIDDYSR
Sbjct: 979  WYQSYYICSARELARMVGIRKAPVLHHFSETVSGAATIRCFNQGEKFFRKSLALIDDYSR 1038

Query: 137  LTFYSSATMEWLSVRINFLFNLVFLSALLILVTLPREAVDPSMAG 3
            +TF++SAT+EWL VRINFLFNLVF   L+ILV++PR  +DPS+AG
Sbjct: 1039 ITFHNSATIEWLCVRINFLFNLVFFVTLVILVSMPRNTIDPSLAG 1083


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