BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029511
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 18/119 (15%)
 Frame = -2

Query: 313 MVSIVAHQDFHIFLRIIHHTNIRIEAFVNTITQLFTNIHFVLPRNDERS----------- 167
           M   +  Q+ H+F R+    N  IE+  + + Q+F N+    P +   +           
Sbjct: 1   MALSIVFQESHVFFRLF---NACIESIKHDVAQIFANVFSFKPYSPANNRPSGHGNLLPF 57

Query: 166 -LND------DSYQINPQDWFLKKETHHNDNEDPHAVFNALDSVLKDTLDRLKKIRESI 11
            L D      + YQ+  QDWF + + H ++  DP  VFN LD++LKD+L+RLK +RES+
Sbjct: 58  ALEDLIISVGNQYQVTTQDWFSQNKGH-DEERDPRVVFNVLDAILKDSLERLKMMRESV 115