BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029504
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589672.1| Pre-rRNA-processing protein IPI3 [Medicago t...    64   2e-14
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l...    63   3e-14
ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-l...    63   4e-14
ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [...    61   1e-13
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2...    63   5e-13

>ref|XP_003589672.1| Pre-rRNA-processing protein IPI3 [Medicago truncatula]
           gi|355478720|gb|AES59923.1| Pre-rRNA-processing protein
           IPI3 [Medicago truncatula]
          Length = 393

 Score = 64.3 bits (155), Expect(2) = 2e-14
 Identities = 29/49 (59%), Positives = 40/49 (81%)
 Frame = -3

Query: 147 LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCK 1
           LF+ +  ++ K  YE+SFSEHT+RVT VV G GGC+AI++SAS+D+TCK
Sbjct: 105 LFDDLRSREEKNLYEYSFSEHTMRVTDVVIGNGGCNAIIVSASDDRTCK 153



 Score = 39.3 bits (90), Expect(2) = 2e-14
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -2

Query: 223 VLSDDESLLISGSEDGSVCVWSFY 152
           V SDD+SLLISGSEDG V VWS +
Sbjct: 80  VFSDDDSLLISGSEDGYVRVWSLF 103


>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 63.2 bits (152), Expect(2) = 3e-14
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = -3

Query: 147 LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCK 1
           +F+ +  Q+A   YE+SFSEHTL VT VV G GGC+AI++SAS D+TCK
Sbjct: 152 IFDDLRCQQASNLYEYSFSEHTLTVTDVVIGNGGCNAIIVSASNDRTCK 200



 Score = 39.7 bits (91), Expect(2) = 3e-14
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -2

Query: 223 VLSDDESLLISGSEDGSVCVWSFY 152
           V S+D+SLL+SGSEDGSV VWS +
Sbjct: 127 VFSEDDSLLVSGSEDGSVRVWSLF 150


>ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 62.8 bits (151), Expect(2) = 4e-14
 Identities = 29/49 (59%), Positives = 39/49 (79%)
 Frame = -3

Query: 147 LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCK 1
           +F+ +  Q+A   YE+SFSEHTL VT VV G GGC+AI++SAS+D+TCK
Sbjct: 152 IFDDLRNQQASSLYEYSFSEHTLTVTDVVIGNGGCNAIIVSASKDRTCK 200



 Score = 39.7 bits (91), Expect(2) = 4e-14
 Identities = 17/24 (70%), Positives = 21/24 (87%)
 Frame = -2

Query: 223 VLSDDESLLISGSEDGSVCVWSFY 152
           V S+D+SLL+SGSEDGSV VWS +
Sbjct: 127 VFSEDDSLLVSGSEDGSVRVWSLF 150


>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
           gi|302142303|emb|CBI19506.3| unnamed protein product
           [Vitis vinifera]
          Length = 448

 Score = 61.2 bits (147), Expect(2) = 1e-13
 Identities = 29/49 (59%), Positives = 39/49 (79%)
 Frame = -3

Query: 147 LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCK 1
           +F+ +  ++A   YEHSFSEHTLRVT +V G GG +AI++SASED+TCK
Sbjct: 157 IFDDLRREEAGHLYEHSFSEHTLRVTDIVTGYGGGNAIIVSASEDRTCK 205



 Score = 39.7 bits (91), Expect(2) = 1e-13
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -2

Query: 223 VLSDDESLLISGSEDGSVCVWSFY 152
           V SDDESLLISG+EDG V VWS +
Sbjct: 132 VFSDDESLLISGAEDGCVRVWSLF 155


>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 63.2 bits (152), Expect(2) = 5e-13
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = -3

Query: 159 PSTKLFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCK 1
           P   +F+  ++++A   YEHSF EHTLRVT +V G GG +AI+ISASED+TCK
Sbjct: 149 PLLMIFDDYQMEQASQLYEHSFQEHTLRVTDIVTGYGGGNAIIISASEDRTCK 201



 Score = 35.8 bits (81), Expect(2) = 5e-13
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 223 VLSDDESLLISGSEDGSVCVW 161
           V ++D+SLL+SGSEDGSV VW
Sbjct: 128 VFTEDDSLLVSGSEDGSVRVW 148