BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029483
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   150   1e-34
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   145   4e-33
gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]              144   7e-33
ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis...   144   7e-33
dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombinat...   144   7e-33

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/86 (83%), Positives = 78/86 (90%)
 Frame = +3

Query: 3   KMFSLAVVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLR 182
           K FSLAVV LNQVTTK TEGSFQLTLALGDSWSH+CTNRVILYWNG ER+AYIDKSPSLR
Sbjct: 261 KKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLR 320

Query: 183 SASAPYSVTSRGIRDSASNCKRIRMM 260
           SASAPYSVT +GIR + S CKRI++M
Sbjct: 321 SASAPYSVTGKGIRTATSKCKRIKIM 346


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/86 (79%), Positives = 79/86 (91%)
 Frame = +3

Query: 3   KMFSLAVVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLR 182
           K FSLAVV LNQVTTK TEGSFQL LALG+SWSH+CTNR+ILYWN +ER+AYIDKSPSL+
Sbjct: 261 KSFSLAVVLLNQVTTKHTEGSFQLGLALGESWSHSCTNRIILYWNSNERYAYIDKSPSLK 320

Query: 183 SASAPYSVTSRGIRDSASNCKRIRMM 260
           SA+APYSVT  GIR+S+SNCKR++MM
Sbjct: 321 SATAPYSVTRGGIRNSSSNCKRVKMM 346


>gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
          Length = 363

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +3

Query: 3   KMFSLAVVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLR 182
           K FSLAVV LNQVTTKF+EGSFQL LALGDSWSH+CTNRVILYWNG ER+AYIDKSPSL 
Sbjct: 278 KKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLP 337

Query: 183 SASAPYSVTSRGIRDSASNCKRIRMM 260
           SASA Y+VTSRG+R+S+S+ KR++MM
Sbjct: 338 SASASYTVTSRGLRNSSSSSKRVKMM 363


>ref|NP_001189749.1| DNA repair protein RAD51-like 3 [Arabidopsis thaliana]
           gi|330255440|gb|AEC10534.1| DNA repair protein
           RAD51-like 3 [Arabidopsis thaliana]
          Length = 387

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +3

Query: 3   KMFSLAVVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLR 182
           K FSLAVV LNQVTTKF+EGSFQL LALGDSWSH+CTNRVILYWNG ER+AYIDKSPSL 
Sbjct: 302 KKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLP 361

Query: 183 SASAPYSVTSRGIRDSASNCKRIRMM 260
           SASA Y+VTSRG+R+S+S+ KR++MM
Sbjct: 362 SASASYTVTSRGLRNSSSSSKRVKMM 387


>dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
           [Arabidopsis thaliana]
          Length = 342

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +3

Query: 3   KMFSLAVVQLNQVTTKFTEGSFQLTLALGDSWSHACTNRVILYWNGSERFAYIDKSPSLR 182
           K FSLAVV LNQVTTKF+EGSFQL LALGDSWSH+CTNRVILYWNG ER+AYIDKSPSL 
Sbjct: 257 KKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLP 316

Query: 183 SASAPYSVTSRGIRDSASNCKRIRMM 260
           SASA Y+VTSRG+R+S+S+ KR++MM
Sbjct: 317 SASASYTVTSRGLRNSSSSSKRVKMM 342