BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029473
         (776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]   105   8e-21
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                 105   1e-20
ref|XP_004153378.1| PREDICTED: uncharacterized protein LOC101218...   104   2e-20
prf||1510387A retrotransposon del1-46                                 103   3e-20
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   103   3e-20

>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
          Length = 984

 Score =  105 bits (263), Expect = 8e-21
 Identities = 47/77 (61%), Positives = 64/77 (83%)
 Frame = +3

Query: 546  VEFSVGDFVFLKVFPMRGVMRFGMKGKLSPRYIGLYEIIASIGSLAYRLALQPNLAMIHD 725
            +EF VGD VFLKV PM+ VMRFG KGKLSPR++GL+EI+  +G+LAY++AL P+L+ +H+
Sbjct: 833  LEFEVGDHVFLKVSPMKSVMRFGRKGKLSPRFVGLFEILERVGTLAYKVALPPSLSKVHN 892

Query: 726  VFHMSMLRKCVKDPTQV 776
            VFH+S LRK + DP+ V
Sbjct: 893  VFHVSTLRKYIYDPSHV 909



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
 Frame = +1

Query: 106 VDLIVLGFEGFHFILRMDWLTRYHVTLDCARREVIVNTPGMPR-----------LIHTCV 252
           VDL++L  + F  IL MDWL  YH +++C  + V  + PG P+           L     
Sbjct: 3   VDLVLLDLQDFDVILGMDWLASYHASVNCFEKRVTFSIPGQPKFSFERKHVDRPLCMISA 62

Query: 253 SKEDSVMSS----FLCSIEIPTRDISXXXXXXXXXXXX---QEIPGLPPKREVEFRIDLL 411
            +  S++      FL S+     D+                +++PGLPP+REVEF IDL+
Sbjct: 63  LRASSLLKKGCQGFLASVMSNESDLKLEDIPIVREYPDVFPEDLPGLPPEREVEFTIDLV 122

Query: 412 LGTAPVSKLAYKLAPKLLEEMK 477
            GT P+SK  Y++AP  L+E+K
Sbjct: 123 PGTGPMSKAPYRMAPVELKELK 144


>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score =  105 bits (261), Expect = 1e-20
 Identities = 49/77 (63%), Positives = 63/77 (81%)
 Frame = +3

Query: 546  VEFSVGDFVFLKVFPMRGVMRFGMKGKLSPRYIGLYEIIASIGSLAYRLALQPNLAMIHD 725
            +EF VGD VFLKV PM+GV+RF  +GKLSPR++G +EI+  IG +AYRLAL P+L+ +HD
Sbjct: 780  LEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHD 839

Query: 726  VFHMSMLRKCVKDPTQV 776
            VFH+SMLRK V DP+ V
Sbjct: 840  VFHVSMLRKYVPDPSHV 856


>ref|XP_004153378.1| PREDICTED: uncharacterized protein LOC101218423 [Cucumis sativus]
          Length = 207

 Score =  104 bits (259), Expect = 2e-20
 Identities = 47/77 (61%), Positives = 61/77 (79%)
 Frame = +3

Query: 546 VEFSVGDFVFLKVFPMRGVMRFGMKGKLSPRYIGLYEIIASIGSLAYRLALQPNLAMIHD 725
           +EF VGD +FLKV P+ GV+RF  KGKLSPR++GL+EI+  IG +AY LAL P L+ +HD
Sbjct: 64  LEFDVGDMIFLKVAPITGVLRFEKKGKLSPRFVGLFEILERIGPVAYHLALPPQLSAVHD 123

Query: 726 VFHMSMLRKCVKDPTQV 776
           VFH+SMLRK V DP+ +
Sbjct: 124 VFHVSMLRKYVADPSHI 140


>prf||1510387A retrotransposon del1-46
          Length = 1443

 Score =  103 bits (258), Expect = 3e-20
 Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
 Frame = +1

Query: 22  VETPLGGSVTLYDECKGFKLCFLERVFMVDLIVLGFEGFHFILRMDWLTRYHVTLDCARR 201
           V +P+G S  +   CKG  +    +   VDLI+L  E    +L MDWL  YHV LDC  +
Sbjct: 380 VISPIGTSTFVNQVCKGCMITIGNQELTVDLIILDLEDPDILLGMDWLAAYHVVLDCFSK 439

Query: 202 EVIVNTPGMPRLI------HTCV-----SKEDSVMSSFLCSIEI-PTRDISXXXXXXXXX 345
           +V  + PG+P         HT           S ++S    I I P+ D+S         
Sbjct: 440 KVTFHLPGIPEFHFHGETQHTFFPTFTHQPNLSYLASLASEINITPSTDLSLIVREYINV 499

Query: 346 XXXQEIPGLPPKREVEFRIDLLLGTAPVSKLAYKLAPKLLEEMKVQVKELLRKG 507
               ++PGLPP RE+EF+I+LL GT+P+S   Y +AP  L+E+K Q+++LL KG
Sbjct: 500 FP-DDLPGLPPPREIEFQINLLPGTSPISITPYHMAPSELQELKEQLEDLLNKG 552



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 43/77 (55%), Positives = 56/77 (72%)
 Frame = +3

Query: 546  VEFSVGDFVFLKVFPMRGVMRFGMKGKLSPRYIGLYEIIASIGSLAYRLALQPNLAMIHD 725
            +EFSVG+ +FL+V P +G   F  KGKLSPRY G +EI+  I  +AYRLAL P L+ IH+
Sbjct: 1300 LEFSVGNHIFLEVSPRKGTSYFVFKGKLSPRYTGPFEILEIIWPVAYRLALPPMLSSIHN 1359

Query: 726  VFHMSMLRKCVKDPTQV 776
            VFH+SMLRK   DP+ +
Sbjct: 1360 VFHISMLRKYEPDPSHI 1376


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  103 bits (258), Expect = 3e-20
 Identities = 47/77 (61%), Positives = 60/77 (77%)
 Frame = +3

Query: 546  VEFSVGDFVFLKVFPMRGVMRFGMKGKLSPRYIGLYEIIASIGSLAYRLALQPNLAMIHD 725
            +EF V D+V+LKV PM+GVMRFG KGKLSPRYIG Y I+  +GS+AY L L   LA +H 
Sbjct: 1454 LEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVHP 1513

Query: 726  VFHMSMLRKCVKDPTQV 776
            VFH+SML+KC+ DP+ +
Sbjct: 1514 VFHISMLKKCIGDPSLI 1530