BLASTX nr result

ID: Coptis25_contig00029468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029468
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330061.1| cc-nbs-lrr resistance protein [Populus trich...    68   9e-10
ref|XP_002268551.2| PREDICTED: putative disease resistance RPP13...    67   2e-09
ref|XP_002268806.2| PREDICTED: putative disease resistance RPP13...    66   3e-09
emb|CAN62744.1| hypothetical protein VITISV_019639 [Vitis vinifera]    66   3e-09
ref|XP_002268016.2| PREDICTED: putative disease resistance prote...    65   6e-09

>ref|XP_002330061.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222871486|gb|EEF08617.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1118

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 9/115 (7%)
 Frame = -2

Query: 421 CIKFCYLFPKTHEFNKDDIIQLWIAEGFI--PVTHIRLETTAGLYIEALQELSIFQFS-- 254
           C  +C +FP+ HEFNKD++I+LW+AEGF+  P  +  +E     +   L   S FQ S  
Sbjct: 429 CFAYCAIFPENHEFNKDELIRLWMAEGFLVPPKRNKEMEEVGNEFFHDLVSRSFFQQSSG 488

Query: 253 -----FLASTGEPRYKLNPSIVDLFEERHSALDEYYRVDDGGNSCISENTLHSSF 104
                F  S+G+P + ++  I DL   R+ A +  +R++   ++ I+E T H S+
Sbjct: 489 KSRSVFQGSSGDPLFIMHDLINDL--ARYVAREFCFRLEGEDSNKITERTRHLSY 541


>ref|XP_002268551.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1373

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
 Frame = -2

Query: 421 CIKFCYLFPKTHEFNKDDIIQLWIAEGFIPVTH--IRLETTAGLYIEALQELSIFQFSFL 248
           C  +C +FPK +EFNKDD++ LW+AEGF+  T    R E     Y   L   S FQ S  
Sbjct: 432 CFAYCSMFPKDYEFNKDDLVLLWMAEGFLQKTKEAARPEDLGSKYFNDLFSRSFFQHS-- 489

Query: 247 ASTGEPRYKLNPSIVDLFEERHSALDEYYRVD----DGGNSCISENTLHSSF 104
            S    RY ++  I DL +    A + Y+ +D    +   S ISE T HSSF
Sbjct: 490 -SRNSSRYVMHDLINDLAQS--VAGEIYFHLDGAWENNKQSTISEKTRHSSF 538


>ref|XP_002268806.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1629

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
 Frame = -2

Query: 445 LDGEVMWSCIKFCYLFPKTHEFNKDDIIQLWIAEGFIPVTH--IRLETTAGLYIEALQEL 272
           L   + W C  +C +FPK +EFNKDD++ LW+AEGF+  T    R E     Y + L   
Sbjct: 427 LPSHLKW-CFAYCSMFPKDYEFNKDDLVLLWMAEGFLQKTKEAARPEDLGSKYFDDLFSR 485

Query: 271 SIFQFSFLASTGEPRYKLNPSIVDLFEERHSALDEYYRVD----DGGNSCISENTLHSSF 104
           S FQ S   S    RY ++  I DL +    A + Y+ +D    +   S ISE T HSSF
Sbjct: 486 SFFQHSGPYSA---RYVMHDLINDLAQS--VAGEIYFHLDSAWENNKQSTISEKTRHSSF 540


>emb|CAN62744.1| hypothetical protein VITISV_019639 [Vitis vinifera]
          Length = 1420

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
 Frame = -2

Query: 445 LDGEVMWSCIKFCYLFPKTHEFNKDDIIQLWIAEGFIPVTH--IRLETTAGLYIEALQEL 272
           L   + W C  +C +FPK +EFNKDD++ LW+AEGF+  T    R E     Y + L   
Sbjct: 427 LPSHLKW-CFAYCSMFPKDYEFNKDDLVLLWMAEGFLQKTKEAARPEDLGSKYFDDLFSR 485

Query: 271 SIFQFSFLASTGEPRYKLNPSIVDLFEERHSALDEYYRVD----DGGNSCISENTLHSSF 104
           S FQ S   S    RY ++  I DL +    A + Y+ +D    +   S ISE T HSSF
Sbjct: 486 SFFQHSGPYSA---RYVMHDLINDLAQS--VAGEIYFHLDSAWENNKQSTISEKTRHSSF 540


>ref|XP_002268016.2| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 1385

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
 Frame = -2

Query: 421 CIKFCYLFPKTHEFNKDDIIQLWIAEGFIPVTH-IRLETTAGLYIEALQELSIFQFSFLA 245
           C  +C +FPK +EFNKDD++ LW+AEGF+  T   R E     Y   L   S FQ S   
Sbjct: 432 CFAYCSMFPKDYEFNKDDLVLLWMAEGFLQKTEAARPEDLGSKYFNDLFSRSFFQHS--- 488

Query: 244 STGEPRYKLNPSIVDLFEERHSALDEYYRVD----DGGNSCISENTLHSSF 104
           S    RY ++  I DL +    A + Y+ +D    +   S + E T HSSF
Sbjct: 489 SRNSSRYVMHDLINDLAQS--VAGEIYFHLDSARENNKQSTVFEKTRHSSF 537


Top