BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029442
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]              100   2e-19
gb|ACN32036.1| unknown [Zea mays]                                      70   2e-10
gb|ACL54615.1| unknown [Zea mays]                                      70   2e-10
ref|XP_002324404.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002330417.1| predicted protein [Populus trichocarpa] gi|222871802|gb|EEF08933.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/93 (75%), Positives = 78/93 (83%)
 Frame = -2

Query: 279 MDAGNTSSTGVVVPNHSGFMSIKLDRTNYSLWLAQIVPVLKSKTLMGFVDGTKPSPSEFK 100
           M+A N SSTGVVVP+HSGFMSIKLDRTNY LWLAQIVP+LKSK LMGFV GT P P EFK
Sbjct: 1   MEAIN-SSTGVVVPSHSGFMSIKLDRTNYPLWLAQIVPILKSKNLMGFVTGTNPCPPEFK 59

Query: 99  RDATGAVTTEVDPECAVWNQRDQMILSWINSSL 1
            +  G +TTEVDP  A W+Q+DQMILSWIN+SL
Sbjct: 60  SNTDGTITTEVDPRYATWHQQDQMILSWINNSL 92


>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/88 (54%), Positives = 62/88 (70%)
 Frame = -2

Query: 264 TSSTGVVVPNHSGFMSIKLDRTNYSLWLAQIVPVLKSKTLMGFVDGTKPSPSEFKRDATG 85
           +SS+    P+ S F++IKLDRTNY LWLAQI P+LKS+ L GFVDGT   P  F +D  G
Sbjct: 3   SSSSTENTPSVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKAG 62

Query: 84  AVTTEVDPECAVWNQRDQMILSWINSSL 1
            +T +V+P+   W  +DQM+LSWIN SL
Sbjct: 63  QLTDQVNPDFEPWILQDQMVLSWINGSL 90


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
 Frame = -2

Query: 240 PNHSGFMSIKLDRTNYSLWLAQIVPVLKSKTLMGFVDGTKPSPSEF----KRDATGAVTT 73
           P  S  +S+KL+  NY LW+AQ++P L+S+ L G +DG+ P+P +       + +G  T 
Sbjct: 20  PAFSQMVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTI 79

Query: 72  EVDPECAVWNQRDQMILSWINSSL 1
            ++PE   W  +DQ++LS INSSL
Sbjct: 80  AINPEFTSWYHQDQLVLSVINSSL 103


>gb|ACL54615.1| unknown [Zea mays]
          Length = 376

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
 Frame = -2

Query: 240 PNHSGFMSIKLDRTNYSLWLAQIVPVLKSKTLMGFVDGTKPSPSEF----KRDATGAVTT 73
           P  S  +S+KL+  NY LW+AQ++P L+S+ L G +DG+ P+P +       + +G  T 
Sbjct: 20  PAFSQMVSMKLNHENYLLWVAQVLPYLRSQGLSGHIDGSLPAPRQTVAVDPAEGSGGRTI 79

Query: 72  EVDPECAVWNQRDQMILSWINSSL 1
            ++PE   W  +DQ++LS INSSL
Sbjct: 80  AINPEFTSWYHQDQLVLSVINSSL 103


>ref|XP_002324404.1| predicted protein [Populus trichocarpa] gi|222865838|gb|EEF02969.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = -2

Query: 231 SGFMSIKLDRTNYSLWLAQIVPVLKSKTLMGFV-DGTKPSPSEFKRDATGAVTTEVDPEC 55
           + F  +KL R NY LWL QIVP L+ + L G+V D T P PS       G  TT  +P  
Sbjct: 19  TNFNPVKLTRDNYPLWLPQIVPHLRGRNLFGYVDDSTPPPPSTVSSTIDGVTTTSPNPVF 78

Query: 54  AVWNQRDQMILSWINSSL 1
             W ++DQ+IL  INS+L
Sbjct: 79  LHWTKQDQIILGAINSTL 96