BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029440
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...    94   1e-17
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...    85   7e-15
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...    85   7e-15
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL...    85   7e-15

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 55/107 (51%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = -3

Query: 571 KDGLLLSESDRENFLKRFEHKIILS--NESGSHNRWSDLRPSDLLYLQSEMIISNNGRYS 398
           KD LLL+  DR +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R  
Sbjct: 271 KDELLLTSEDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRR-- 328

Query: 397 LSSNQHKRVAEDKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 257
           LSS          SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 329 LSSCHGTIEGGSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 55/107 (51%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = -3

Query: 571 KDGLLLSESDRENFLKRFEHKIILS--NESGSHNRWSDLRPSDLLYLQSEMIISNNGRYS 398
           KD LLL+  DR +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R  
Sbjct: 271 KDELLLTSEDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRR-- 328

Query: 397 LSSNQHKRVAEDKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 257
           LSS          SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 329 LSSCHGTIEGGSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
           gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
           thaliana] gi|61656157|gb|AAX49381.1| At5g05810
           [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
           RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = -3

Query: 571 KDGLLLSESDRENFLKRFEHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLS 392
           KDGLLL  + RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+       
Sbjct: 242 KDGLLLIPN-RESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD------- 293

Query: 391 SNQHKRVAEDKSGRDVINARSVSEITGLNR 302
               +++A  + GRDVIN RSVSE+TG+ R
Sbjct: 294 ---CRKLAAAEGGRDVINGRSVSELTGIER 320


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
           gi|223550481|gb|EEF51968.1| ring finger protein,
           putative [Ricinus communis]
          Length = 493

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 48/104 (46%), Positives = 62/104 (59%), Gaps = 15/104 (14%)
 Frame = -3

Query: 523 RFEHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQHKRVAE------- 365
           RFEH+II+S  + S  RWSD+ PSDLLYL+SEMI+S+N R+S++S     V         
Sbjct: 357 RFEHRIIVSGNA-SDERWSDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQ 415

Query: 364 --------DKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 257
                      GR VIN RSVSEITGLNRFS +    + +  +R
Sbjct: 416 QNAVVKGPSSDGRSVINGRSVSEITGLNRFSDRESNNSRHHRER 459


>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
           gi|9759106|dbj|BAB09675.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 407

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 47/90 (52%), Positives = 63/90 (70%)
 Frame = -3

Query: 571 KDGLLLSESDRENFLKRFEHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLS 392
           KDGLLL  + RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+       
Sbjct: 296 KDGLLLIPN-RESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD------- 347

Query: 391 SNQHKRVAEDKSGRDVINARSVSEITGLNR 302
               +++A  + GRDVIN RSVSE+TG+ R
Sbjct: 348 ---CRKLAAAEGGRDVINGRSVSELTGIER 374