BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029430
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523406.1| RNA binding protein, putative [Ricinus commu...   238   7e-61
ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|2...   198   1e-48
ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vi...   194   2e-47
emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]   194   2e-47
emb|CBI16556.3| unnamed protein product [Vitis vinifera]              166   3e-39

>ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
           gi|223537356|gb|EEF38985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score =  238 bits (608), Expect = 7e-61
 Identities = 121/245 (49%), Positives = 167/245 (68%), Gaps = 14/245 (5%)
 Frame = -2

Query: 693 KISQSHIPWQHMEEEQYFRMQQQYLYMQQFRSQVPEARH--HENVNMATGPITGNPRQTY 520
           + +Q HI W+++EEEQ++RM QQYLY+QQ  +Q  EA+H    N N+AT  +  + RQ Y
Sbjct: 229 QFNQPHISWRNIEEEQFYRMHQQYLYLQQLHNQRLEAQHPMQANGNVATKLMNRHVRQPY 288

Query: 519 FKVPTPHQIRQTNEDPYWNNASI-----------QVLDRVGRHNFPEKILTKSHGFNLLK 373
           F+VP  HQ++Q N++  WN+ ++            +LD VG+ +FPEKILT+S G + LK
Sbjct: 289 FEVPVSHQLQQPNQEQVWNDYAVTRGLNQSQNGMNILDEVGKQSFPEKILTRSQGLSTLK 348

Query: 372 VLNGGSIGGDESLYHVN-NEKVLPDDHFHHRSPILNSKSFPLDDQTSPGSSPDSVDLKFY 196
            +   S GG+ESL +++ N KVL + H  H     +++ F LD  +S   SPD +DLK  
Sbjct: 349 AVKYSSAGGNESLANLSQNGKVLLNGHLRHTLTPPSAECFQLDHLSSWDLSPDIIDLKST 408

Query: 195 NLRSQSPKYNSLDEVKGRIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMT 16
           NLR Q  KYNS+DEV GR+YL+AKDQHGCRFLQ+KF+EG  +D++KIF E+I HI ELMT
Sbjct: 409 NLRPQPQKYNSVDEVTGRVYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMT 468

Query: 15  DPFGN 1
           DPFGN
Sbjct: 469 DPFGN 473


>ref|XP_002297618.1| predicted protein [Populus trichocarpa] gi|222844876|gb|EEE82423.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  198 bits (503), Expect = 1e-48
 Identities = 117/237 (49%), Positives = 153/237 (64%), Gaps = 3/237 (1%)
 Frame = -2

Query: 702 NNNKISQSHIPWQHMEEEQYFRMQQQYLYMQQFRSQVPEARHHE--NVNMATGPITGNPR 529
           ++ ++++SHI W+++EEEQ +RM QQ LY+QQ R+Q  EA++    N N+ T  ++ N R
Sbjct: 148 HSQQLNRSHINWRNIEEEQCYRMHQQCLYLQQLRNQRLEAQNPTPANGNVETKLMSRNVR 207

Query: 528 QTYFKVPTPHQIRQTNEDPYWNNASIQVLDRVGRHNFPEKILTKSHGFNLLKVLNGGSIG 349
           Q                 PY  N  I+VLD+VG+ +FPEKILT+S G N LK L  GS+G
Sbjct: 208 Q-----------------PYLENG-IRVLDKVGKQSFPEKILTRSQGLNTLKALKFGSVG 249

Query: 348 GDESLYHVN-NEKVLPDDHFHHRSPILNSKSFPLDDQTSPGSSPDSVDLKFYNLRSQSPK 172
           G+ESL H+N N K+L + H  H      S S P     + G+          NLR+Q PK
Sbjct: 250 GNESLAHLNHNGKLLSNAHLFH------SLSTP-----TAGT----------NLRAQPPK 288

Query: 171 YNSLDEVKGRIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHIVELMTDPFGN 1
           YNS+DEV GRIYL+AKDQHGCRFLQ+ F+EG  +DV+KIF EII HIVELMTDPFGN
Sbjct: 289 YNSVDEVTGRIYLMAKDQHGCRFLQRTFSEGTPQDVEKIFLEIIDHIVELMTDPFGN 345


>ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
          Length = 711

 Score =  194 bits (492), Expect = 2e-47
 Identities = 108/251 (43%), Positives = 147/251 (58%), Gaps = 20/251 (7%)
 Frame = -2

Query: 693 KISQSHIPWQHMEEEQYFRMQQQYLYMQQFRSQVPEARHHENVNMATGPITGNPRQTYFK 514
           ++ Q    W H+E+E Y ++ QQY Y  Q   +  +     N N+AT  ++   RQ YF+
Sbjct: 197 QLGQHKFDWMHVEKEHYHKLHQQYRYQVQNMGRGAQHPIQANGNVATRLVSQEMRQPYFE 256

Query: 513 VPTPHQIRQTNEDPYWNNA-------------------SIQVLDRVGRHNFPEKILTKSH 391
             TPHQ  +++++ +WN                     +I VLD+VG+   PEKILT+S+
Sbjct: 257 --TPHQFEKSHQESFWNKYRIVKGLNESNPGLSSTDFNAIHVLDKVGKMTIPEKILTRSN 314

Query: 390 GFNLLKVLNGGSIGGDESLYHVN-NEKVLPDDHFHHRSPILNSKSFPLDDQTSPGSSPDS 214
           G N L+ +  GSI  +E+  HVN N +V+P+ HF  R     +    LD   +   S D+
Sbjct: 315 GLNSLRTIKFGSIRENEAGTHVNQNGRVIPNGHFRQRLSSPTAGHLQLDSLCTWSLSTDT 374

Query: 213 VDLKFYNLRSQSPKYNSLDEVKGRIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGH 34
             LK   LR Q  KYNS+DEV GRIY ++KDQ+GCRFLQ+KFT+G  EDV KIF EII H
Sbjct: 375 AHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDH 434

Query: 33  IVELMTDPFGN 1
           IVELMTDPFGN
Sbjct: 435 IVELMTDPFGN 445


>emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
          Length = 1051

 Score =  194 bits (492), Expect = 2e-47
 Identities = 108/251 (43%), Positives = 147/251 (58%), Gaps = 20/251 (7%)
 Frame = -2

Query: 693 KISQSHIPWQHMEEEQYFRMQQQYLYMQQFRSQVPEARHHENVNMATGPITGNPRQTYFK 514
           ++ Q    W H+E+E Y ++ QQY Y  Q   +  +     N N+AT  ++   RQ YF+
Sbjct: 238 QLGQHKFDWMHVEKEHYHKLHQQYRYQVQNMGRGAQHPIQANGNVATRLVSQEMRQPYFE 297

Query: 513 VPTPHQIRQTNEDPYWNNA-------------------SIQVLDRVGRHNFPEKILTKSH 391
             TPHQ  +++++ +WN                     +I VLD+VG+   PEKILT+S+
Sbjct: 298 --TPHQFEKSHQESFWNKYRIVKGLNESNPGLSSTDFNAIHVLDKVGKMTIPEKILTRSN 355

Query: 390 GFNLLKVLNGGSIGGDESLYHVN-NEKVLPDDHFHHRSPILNSKSFPLDDQTSPGSSPDS 214
           G N L+ +  GSI  +E+  HVN N +V+P+ HF  R     +    LD   +   S D+
Sbjct: 356 GLNSLRTIKFGSIRENEAGTHVNQNGRVIPNGHFRQRLSSPTAGHLQLDSLCTWSLSTDT 415

Query: 213 VDLKFYNLRSQSPKYNSLDEVKGRIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGH 34
             LK   LR Q  KYNS+DEV GRIY ++KDQ+GCRFLQ+KFT+G  EDV KIF EII H
Sbjct: 416 AHLKTNILRPQPQKYNSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDH 475

Query: 33  IVELMTDPFGN 1
           IVELMTDPFGN
Sbjct: 476 IVELMTDPFGN 486


>emb|CBI16556.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  166 bits (421), Expect = 3e-39
 Identities = 98/250 (39%), Positives = 133/250 (53%), Gaps = 19/250 (7%)
 Frame = -2

Query: 693 KISQSHIPWQHMEEEQYFRMQQQYLYMQQFRSQVPEARHHENVNMATGPITGNPRQTYFK 514
           ++ Q    W H+E+E Y ++ QQY Y  Q   +  +     N N+AT  ++   RQ YF+
Sbjct: 238 QLGQHKFDWMHVEKEHYHKLHQQYRYQVQNMGRGAQHPIQANGNVATRLVSQEMRQPYFE 297

Query: 513 VPTPHQIRQTNEDPYWNNA-------------------SIQVLDRVGRHNFPEKILTKSH 391
             TPHQ  +++++ +WN                     +I VLD+VG+   PEKILT+S+
Sbjct: 298 --TPHQFEKSHQESFWNKYRIVKGLNESNPGLSSTDFNAIHVLDKVGKMTIPEKILTRSN 355

Query: 390 GFNLLKVLNGGSIGGDESLYHVNNEKVLPDDHFHHRSPILNSKSFPLDDQTSPGSSPDSV 211
           G N L+ +  GSI  +E+                             D   +   S D+ 
Sbjct: 356 GLNSLRTIKFGSIRENEA-----------------------------DSLCTWSLSTDTA 386

Query: 210 DLKFYNLRSQSPKYNSLDEVKGRIYLIAKDQHGCRFLQKKFTEGCAEDVDKIFTEIIGHI 31
            LK   LR Q  KYNS+DEV GRIY ++KDQ+GCRFLQ+KFT+G  EDV KIF EII HI
Sbjct: 387 HLKTNILRPQPQKYNSVDEVVGRIYHMSKDQNGCRFLQRKFTDGSPEDVQKIFLEIIDHI 446

Query: 30  VELMTDPFGN 1
           VELMTDPFGN
Sbjct: 447 VELMTDPFGN 456