BLASTX nr result
ID: Coptis25_contig00029417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00029417
(365 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16093.3| unnamed protein product [Vitis vinifera] 112 2e-23
emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera] 112 2e-23
emb|CBI28363.3| unnamed protein product [Vitis vinifera] 95 5e-18
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi... 95 5e-18
emb|CBI38165.3| unnamed protein product [Vitis vinifera] 94 1e-17
>emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 112 bits (281), Expect = 2e-23
Identities = 54/120 (45%), Positives = 79/120 (65%)
Frame = +2
Query: 2 GNIVLGQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLI 181
G + LG+ +H ++K GL D++V TSL+ MYAKCG+V+SA ++ + D T N LI
Sbjct: 127 GCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLI 186
Query: 182 SGYASNGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLKLQNL 361
S YA NG QA ++F+Q ++G PN YT+S +L +CG + I+EG QLH V+K+Q L
Sbjct: 187 SAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYL 246
Score = 72.8 bits (177), Expect = 3e-11
Identities = 42/120 (35%), Positives = 67/120 (55%)
Frame = +2
Query: 5 NIVLGQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLIS 184
N+ G+ HG + G+ D YV ++L+ MYAKCG + AK LF + + VT+NSLI
Sbjct: 471 NLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIF 530
Query: 185 GYASNGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLKLQNLE 364
GYA++G ++A+ELF Q + TF+ VL C + ++ G L ++ + +E
Sbjct: 531 GYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIE 590
Score = 66.6 bits (161), Expect = 2e-09
Identities = 32/94 (34%), Positives = 57/94 (60%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+ H ++K + + V +L+++Y+KCG +E A+ +F L +I+++ + I+G+
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQ 292
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICG 298
+G+ +AL+ F GI PN +TFSIVL CG
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASCG 326
Score = 64.7 bits (156), Expect = 7e-09
Identities = 36/110 (32%), Positives = 62/110 (56%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+ H +I+KN D Y++++L+ MY+KCG VE A +F + ++V++N+LI+G+
Sbjct: 389 GENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI--PNVVSWNTLIAGF-- 444
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVL 346
SQ L+ G P+ T S +L C NV ++ G ++HG +
Sbjct: 445 ----SQMLD-------QGFCPSSVTISSLLPACTNVANLRHGKEIHGYAM 483
>emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 112 bits (281), Expect = 2e-23
Identities = 54/120 (45%), Positives = 79/120 (65%)
Frame = +2
Query: 2 GNIVLGQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLI 181
G + LG+ +H ++K GL D++V TSL+ MYAKCG+V+SA ++ + D T N LI
Sbjct: 127 GCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLI 186
Query: 182 SGYASNGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLKLQNL 361
S YA NG QA ++F+Q ++G PN YT+S +L +CG + I+EG QLH V+K+Q L
Sbjct: 187 SAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYL 246
Score = 77.8 bits (190), Expect = 8e-13
Identities = 39/111 (35%), Positives = 66/111 (59%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+ H ++K + + V +L+++Y+KCG +E A+ +F LR +I+++ + I+G+
Sbjct: 233 GKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQ 292
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
+G+ +AL+ F GI PN +TFSIVL CG V +G H QV+K
Sbjct: 293 HGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIK 343
Score = 73.2 bits (178), Expect = 2e-11
Identities = 42/120 (35%), Positives = 67/120 (55%)
Frame = +2
Query: 5 NIVLGQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLIS 184
N+ G+ HG + G+ D YV ++L+ MYAKCG + AK LF + + VT+NSLI
Sbjct: 1090 NLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIF 1149
Query: 185 GYASNGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLKLQNLE 364
GYA++G ++A+ELF Q + TF+ VL C + ++ G L ++ + +E
Sbjct: 1150 GYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIE 1209
Score = 70.9 bits (172), Expect = 1e-10
Identities = 31/90 (34%), Positives = 57/90 (63%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+ H +I+KN D Y++++L+ MY+KCG VE A +F + D+V N+++SGYA
Sbjct: 923 GENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQ 982
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVL 286
+G + +AL+L + G+ PN +++ ++
Sbjct: 983 HGFVHEALBLVQKMQQAGVKPNVVSWNTLI 1012
Score = 64.7 bits (156), Expect = 7e-09
Identities = 31/100 (31%), Positives = 58/100 (58%)
Frame = +2
Query: 29 HGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYASNGNL 208
H +IK+ + + +V +SL+ Y +CG +E+A ++F + +D+V++NS+I Y+ NG+
Sbjct: 440 HSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDP 499
Query: 209 SQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQ 328
+A+ L + G P TF VL C + ++EG +
Sbjct: 500 WKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQE 539
Score = 62.0 bits (149), Expect = 5e-08
Identities = 30/112 (26%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGL-RGSDIVTYNSLISGYA 193
G+ +H +IK G+ +V T+++ MY+ G+++ A++ F + R + V++N+LI+GY
Sbjct: 334 GRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYV 393
Query: 194 SNGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
N + +A+E F + + N +T+S + C + + +Q+H +++K
Sbjct: 394 LNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIK 445
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/111 (27%), Positives = 53/111 (47%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+ H ++ GL Y LMS Y +CG + +A++LF + ++I + L A
Sbjct: 822 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
G +AL F + G+ PN + +L CG++ + G +H +LK
Sbjct: 882 RGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK 932
>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
Length = 930
Score = 95.1 bits (235), Expect = 5e-18
Identities = 44/112 (39%), Positives = 68/112 (60%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+G HGL++K + D +V +L+SMY CG +E A +F G+ D+V ++S++SGY
Sbjct: 140 GRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVK 199
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLKL 352
NG + L +F S GI P+ + FS+VLG C N+ C G Q H ++K+
Sbjct: 200 NGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKM 251
Score = 62.0 bits (149), Expect = 5e-08
Identities = 31/97 (31%), Positives = 61/97 (62%)
Frame = +2
Query: 59 YDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYASNGNLSQALELFVQA 238
YD++++TSL+ + +E+AK +F + D +++LISG++ NG ++AL+LF +
Sbjct: 396 YDEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKM 455
Query: 239 HSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
GI N +TF+ V+ C + +++G +LH ++L+
Sbjct: 456 QFDGIKANEFTFTSVILACLALENLRKGKELHCKILR 492
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/111 (28%), Positives = 56/111 (50%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G H IIK G Y+ SLM YAKCGD+E + +F + ++V++N+ I+GY
Sbjct: 241 GTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVH 300
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
N + +AL +F + ++ +L + + G ++HG +L+
Sbjct: 301 NFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILR 351
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Frame = +2
Query: 86 MSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYASNGNLSQALELF--VQAHSLG--I 253
+ MY G ++ A++LF + +V++ ++SGYA +G S+ L +F + S G +
Sbjct: 58 LRMYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLL 117
Query: 254 MPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
P+ + F++VL CG V C+ G +HG V+K
Sbjct: 118 RPDSFVFAVVLRACGMVECLSYGRGVHGLVVK 149
>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 906
Score = 95.1 bits (235), Expect = 5e-18
Identities = 44/112 (39%), Positives = 68/112 (60%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+G HGL++K + D +V +L+SMY CG +E A +F G+ D+V ++S++SGY
Sbjct: 81 GRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVK 140
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLKL 352
NG + L +F S GI P+ + FS+VLG C N+ C G Q H ++K+
Sbjct: 141 NGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKM 192
Score = 82.4 bits (202), Expect = 3e-14
Identities = 43/111 (38%), Positives = 72/111 (64%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G+ +H LIIK L D YV++SL+ MY+KCG E+AK +F + D +++LISG++
Sbjct: 358 GKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSW 417
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
NG ++AL+LF + GI N +TF+ V+ C + +++G +LH ++L+
Sbjct: 418 NGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILR 468
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/111 (28%), Positives = 56/111 (50%)
Frame = +2
Query: 17 GQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYAS 196
G H IIK G Y+ SLM YAKCGD+E + +F + ++V++N+ I+GY
Sbjct: 182 GTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVH 241
Query: 197 NGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
N + +AL +F + ++ +L + + G ++HG +L+
Sbjct: 242 NFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILR 292
Score = 54.7 bits (130), Expect = 8e-06
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Frame = +2
Query: 92 MYAKCGDVESAKELFCGLRGSDIVTYNSLISGYASNGNLSQALELF--VQAHSLG--IMP 259
MY G ++ A++LF + +V++ ++SGYA +G S+ L +F + S G + P
Sbjct: 1 MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60
Query: 260 NGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
+ + F++VL CG V C+ G +HG V+K
Sbjct: 61 DSFVFAVVLRACGMVECLSYGRGVHGLVVK 90
>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 93.6 bits (231), Expect = 1e-17
Identities = 44/112 (39%), Positives = 73/112 (65%)
Frame = +2
Query: 14 LGQGYHGLIIKNGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYA 193
+G H L+ K+ D Y+ ++L+ MY+KCG V A+E+F G+ ++VT+NSLI+ Y
Sbjct: 165 MGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYE 224
Query: 194 SNGNLSQALELFVQAHSLGIMPNGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
NG S+ALE+FV+ G+ P+ T + V+ C ++ +KEG+Q+H +V+K
Sbjct: 225 QNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVK 276
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 NGLIYDKYVVTSLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYASNGNLSQALEL 226
N L D +V SL+ MY KCG +E +F ++ D V++N++I GYA NG ++AL++
Sbjct: 386 NLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQI 445
Query: 227 FVQAHSLGIMPNGYTFSIVLGICGNVLCIKEG------MQLHGQV 343
F + G P+ T VL C + ++EG M+ HG +
Sbjct: 446 FRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLI 490
Score = 59.3 bits (142), Expect = 3e-07
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = +2
Query: 80 SLMSMYAKCGDVESAKELFCGLRGSDIVTYNSLISGYASNGNLSQALELFVQAHSLGIMP 259
SL+S+ K G ++ A LF + D ++NS++SG+A + ++LE FV+ H +
Sbjct: 86 SLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLL 145
Query: 260 NGYTFSIVLGICGNVLCIKEGMQLHGQVLK 349
N Y+F L C ++ + G Q+H V K
Sbjct: 146 NEYSFGSALSACAGLMDLNMGTQVHALVSK 175