BLASTX nr result

ID: Coptis25_contig00029414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029414
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   127   9e-28
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   118   6e-25
ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homo...   115   3e-24
ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homo...   115   3e-24
ref|XP_002862209.1| hypothetical protein ARALYDRAFT_359763 [Arab...   114   1e-23

>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/84 (70%), Positives = 68/84 (80%)
 Frame = -1

Query: 313 FMISTVAEELLAYTNIVPEWLCNQCQENLYSGDVLFCHVELIKAKKLHVFLAIHSIDFLI 134
           F+IS+VAEELLA+TNI+PEWLC Q QE L+SG+  F H +LIK KKLHVF A+HS + L 
Sbjct: 458 FIISSVAEELLAFTNIIPEWLCKQRQEKLFSGEPFFAHTQLIKEKKLHVFPAVHSPNLLK 517

Query: 133 RWQEPCIVFSPHWSLRLGYVVHSL 62
            WQEPCI FSPHWSLRLG VVH L
Sbjct: 518 IWQEPCIAFSPHWSLRLGPVVHLL 541


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  118 bits (295), Expect = 6e-25
 Identities = 56/94 (59%), Positives = 72/94 (76%)
 Frame = -1

Query: 352 SIFS*DASHSLAPFMISTVAEELLAYTNIVPEWLCNQCQENLYSGDVLFCHVELIKAKKL 173
           SIF   ++  +  ++IS+VA ELLA+TNI+PEWLC   QE L+SG+ LF HVEL+K KKL
Sbjct: 375 SIFLESSAIKVPIYVISSVAAELLAFTNIIPEWLCKFRQEKLFSGEPLFSHVELMKDKKL 434

Query: 172 HVFLAIHSIDFLIRWQEPCIVFSPHWSLRLGYVV 71
           HVF A+HS + +  WQEPCIVF+ HW+LRLG VV
Sbjct: 435 HVFPAVHSPNLITNWQEPCIVFASHWNLRLGPVV 468


>ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homolog, partial [Cucumis
           sativus]
          Length = 680

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/84 (64%), Positives = 62/84 (73%)
 Frame = -1

Query: 313 FMISTVAEELLAYTNIVPEWLCNQCQENLYSGDVLFCHVELIKAKKLHVFLAIHSIDFLI 134
           + IS+VAEELL + N +PEWLC Q Q  L+SG+ +F  VEL+K  KLHV  AIHS   LI
Sbjct: 367 YFISSVAEELLTFANAIPEWLCRQRQHKLFSGEPMFTFVELLKENKLHVVPAIHSPKLLI 426

Query: 133 RWQEPCIVFSPHWSLRLGYVVHSL 62
            WQEPCIVF PHWSLRLG VVH L
Sbjct: 427 NWQEPCIVFCPHWSLRLGPVVHLL 450


>ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
          Length = 693

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/84 (64%), Positives = 62/84 (73%)
 Frame = -1

Query: 313 FMISTVAEELLAYTNIVPEWLCNQCQENLYSGDVLFCHVELIKAKKLHVFLAIHSIDFLI 134
           + IS+VAEELL + N +PEWLC Q Q  L+SG+ +F  VEL+K  KLHV  AIHS   LI
Sbjct: 380 YFISSVAEELLTFANAIPEWLCRQRQHKLFSGEPMFTFVELLKENKLHVVPAIHSPKLLI 439

Query: 133 RWQEPCIVFSPHWSLRLGYVVHSL 62
            WQEPCIVF PHWSLRLG VVH L
Sbjct: 440 NWQEPCIVFCPHWSLRLGPVVHLL 463


>ref|XP_002862209.1| hypothetical protein ARALYDRAFT_359763 [Arabidopsis lyrata subsp.
           lyrata] gi|297307472|gb|EFH38467.1| hypothetical protein
           ARALYDRAFT_359763 [Arabidopsis lyrata subsp. lyrata]
          Length = 452

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/85 (61%), Positives = 65/85 (76%)
 Frame = -1

Query: 313 FMISTVAEELLAYTNIVPEWLCNQCQENLYSGDVLFCHVELIKAKKLHVFLAIHSIDFLI 134
           F+IS+VAEELLAYTN +PEWLC Q QE L  G+  F H++ IK KK+H+F AIHS + + 
Sbjct: 85  FVISSVAEELLAYTNTIPEWLCEQRQEKLILGEPSFGHLKFIKDKKIHLFPAIHSPNLIT 144

Query: 133 RWQEPCIVFSPHWSLRLGYVVHSLE 59
            WQEPCI+F+PHWSLRLG  V  L+
Sbjct: 145 SWQEPCIIFAPHWSLRLGPSVQLLQ 169


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