BLASTX nr result
ID: Coptis25_contig00029405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00029405
(763 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEC79567.1| hypothetical protein OsI_20717 [Oryza sativa Indi... 78 2e-16
ref|NP_001056118.1| Os05g0528900 [Oryza sativa Japonica Group] g... 75 1e-15
ref|XP_003557277.1| PREDICTED: 50S ribosomal protein L9-like [Br... 72 2e-14
ref|NP_001148489.1| LOC100282104 [Zea mays] gi|195619734|gb|ACG3... 71 3e-14
gb|ACN31533.1| unknown [Zea mays] gi|413925255|gb|AFW65187.1| ri... 71 4e-14
>gb|EEC79567.1| hypothetical protein OsI_20717 [Oryza sativa Indica Group]
Length = 206
Score = 78.2 bits (191), Expect(2) = 2e-16
Identities = 49/104 (47%), Positives = 57/104 (54%)
Frame = -1
Query: 532 KQDK*KEYQLAANRLDNASLVACKHYRFYVFPSYGRKLCFIFRRFGCGKNFL*VLRRMVR 353
+++K KEYQ AA RLDNA LV LRR +
Sbjct: 109 QEEKLKEYQTAAKRLDNALLV---------------------------------LRRFIS 135
Query: 352 SSLSLNELRSPVTKDELVAEVARQLPVNIQPDNLHLPSPLSSFG 221
NELRSPVTKDE+V+EVARQL +NI PDNLHLPSPL+S G
Sbjct: 136 VG---NELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLG 176
Score = 33.9 bits (76), Expect(2) = 2e-16
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -2
Query: 192 RSIPLPDVKLKWTLDIKIRRK 130
R IP P+ KL+WTL +KIRRK
Sbjct: 186 RDIPRPEGKLQWTLTVKIRRK 206
>ref|NP_001056118.1| Os05g0528900 [Oryza sativa Japonica Group]
gi|52353397|gb|AAU43965.1| unknown protein [Oryza sativa
Japonica Group] gi|113579669|dbj|BAF18032.1|
Os05g0528900 [Oryza sativa Japonica Group]
gi|215704236|dbj|BAG93076.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215704483|dbj|BAG93917.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222632311|gb|EEE64443.1| hypothetical protein
OsJ_19289 [Oryza sativa Japonica Group]
Length = 206
Score = 75.1 bits (183), Expect(2) = 1e-15
Identities = 48/104 (46%), Positives = 56/104 (53%)
Frame = -1
Query: 532 KQDK*KEYQLAANRLDNASLVACKHYRFYVFPSYGRKLCFIFRRFGCGKNFL*VLRRMVR 353
+++K KEYQ AA LDNA LV LRR +
Sbjct: 109 QEEKLKEYQTAAKCLDNALLV---------------------------------LRRFIS 135
Query: 352 SSLSLNELRSPVTKDELVAEVARQLPVNIQPDNLHLPSPLSSFG 221
NELRSPVTKDE+V+EVARQL +NI PDNLHLPSPL+S G
Sbjct: 136 VG---NELRSPVTKDEIVSEVARQLNINIHPDNLHLPSPLASLG 176
Score = 33.9 bits (76), Expect(2) = 1e-15
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -2
Query: 192 RSIPLPDVKLKWTLDIKIRRK 130
R IP P+ KL+WTL +KIRRK
Sbjct: 186 RDIPRPEGKLQWTLTVKIRRK 206
>ref|XP_003557277.1| PREDICTED: 50S ribosomal protein L9-like [Brachypodium distachyon]
Length = 202
Score = 72.4 bits (176), Expect(2) = 2e-14
Identities = 46/104 (44%), Positives = 56/104 (53%)
Frame = -1
Query: 532 KQDK*KEYQLAANRLDNASLVACKHYRFYVFPSYGRKLCFIFRRFGCGKNFL*VLRRMVR 353
++++ KEYQ AA RLDNA LV LRR +
Sbjct: 105 QEEQLKEYQAAAKRLDNALLV---------------------------------LRRFIS 131
Query: 352 SSLSLNELRSPVTKDELVAEVARQLPVNIQPDNLHLPSPLSSFG 221
NELR+PVTKDE+V+EVARQL +NI PDN+HL SPLSS G
Sbjct: 132 EG---NELRNPVTKDEIVSEVARQLNINIHPDNVHLLSPLSSLG 172
Score = 32.7 bits (73), Expect(2) = 2e-14
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -2
Query: 192 RSIPLPDVKLKWTLDIKIRR 133
R IP P+ KL+WTL++KIRR
Sbjct: 182 RDIPRPEGKLQWTLNVKIRR 201
>ref|NP_001148489.1| LOC100282104 [Zea mays] gi|195619734|gb|ACG31697.1| ribosomal
protein L9, N-terminal domain containing protein [Zea
mays]
Length = 203
Score = 71.2 bits (173), Expect(2) = 3e-14
Identities = 44/104 (42%), Positives = 57/104 (54%)
Frame = -1
Query: 532 KQDK*KEYQLAANRLDNASLVACKHYRFYVFPSYGRKLCFIFRRFGCGKNFL*VLRRMVR 353
++++ K+YQ AA RLDNA LV LRR +
Sbjct: 106 QEERMKQYQTAAKRLDNALLV---------------------------------LRRFIS 132
Query: 352 SSLSLNELRSPVTKDELVAEVARQLPVNIQPDNLHLPSPLSSFG 221
+ NELR+PVTKDE+V+EVARQL +NI P+NLHL SPL+S G
Sbjct: 133 TG---NELRTPVTKDEIVSEVARQLNINIHPENLHLQSPLASLG 173
Score = 33.1 bits (74), Expect(2) = 3e-14
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -2
Query: 192 RSIPLPDVKLKWTLDIKIRRK 130
++IP P+ KL+WTL +KIRRK
Sbjct: 183 QNIPCPEGKLQWTLKVKIRRK 203
>gb|ACN31533.1| unknown [Zea mays] gi|413925255|gb|AFW65187.1| ribosomal protein L9
domain containing protein [Zea mays]
Length = 203
Score = 70.9 bits (172), Expect(2) = 4e-14
Identities = 44/104 (42%), Positives = 57/104 (54%)
Frame = -1
Query: 532 KQDK*KEYQLAANRLDNASLVACKHYRFYVFPSYGRKLCFIFRRFGCGKNFL*VLRRMVR 353
++++ K+YQ AA RLDNA LV LRR +
Sbjct: 106 QEERMKQYQTAAKRLDNALLV---------------------------------LRRFIS 132
Query: 352 SSLSLNELRSPVTKDELVAEVARQLPVNIQPDNLHLPSPLSSFG 221
+ NELR+PVTKDE+V+EVARQL +NI P+NLHL SPL+S G
Sbjct: 133 TG---NELRTPVTKDEIVSEVARQLNINIHPENLHLHSPLASLG 173
Score = 33.1 bits (74), Expect(2) = 4e-14
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -2
Query: 192 RSIPLPDVKLKWTLDIKIRRK 130
++IP P+ KL+WTL +KIRRK
Sbjct: 183 QNIPCPEGKLQWTLKVKIRRK 203