BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029386
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   149   1e-33
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...   135   2e-29
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   134   4e-29
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   133   1e-28
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...   133   1e-28

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  149 bits (376), Expect = 1e-33
 Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 8/369 (2%)
 Frame = +3

Query: 75   WNVELVNAWWPPEYARKILSTPLA-LEFHDDELIWGANKYGLYTVKSAYNCLLR*CDPSL 251
            W+ + ++   PP+  ++I   PLA +   +D+  W   K G ++VKSAY  + R  + + 
Sbjct: 974  WDTKKISHLLPPDILKQIKEIPLASMSEVEDDFTWNFEKNGTFSVKSAYYLINRREEET- 1032

Query: 252  VNRISIFSKIWKQKLPQKIKFFPWQGLNQVIPTSDLLRKCKFGVDKTCAFCDSD-ESQLH 428
                  +  +W++ +P K K   W G++ ++PT+  L K     +  C  CD   E  +H
Sbjct: 1033 -GGKGSWRGLWRKNIPFKYKLLIWNGIHNILPTALFLAKRIHNFNPQCVACDHPIEDMIH 1091

Query: 429  LFIHCPFARAVWLGLNLHQKVLEPNM---VDFKTWLSEILQTLW*QDDDLSITFTIGLWQ 599
            LF  C  A +VW+ +  H K    N+   ++++ W+   L     Q D     FT   W 
Sbjct: 1092 LFRDCCVASSVWIEILKHHKPNNQNLFFNLEWEEWIDFNLN----QHDYWVTKFTTAFWH 1147

Query: 600  IWKDRNENRFKCKQSSPVQCLFRIRRLVEDIS---KAFCVEDQSPKLKNTSLMVMWSFPP 770
            IW  RN+  F+C  + P    F   R+V D     +AF V +       + +++ W  P 
Sbjct: 1148 IWCSRNKTVFECAVNHPK---FTYNRVVADFFTNIRAFQVNNTQGN--GSKVVLRWKPPH 1202

Query: 771  LGWFKLNTDGSCIGNSGPAGAGCVIRDDTGHFMAGIADSIRVGSSLLAEFYALKLGLMVV 950
             G+ KLNTDG+   +   AG G V RD  G++  G A  +  GS   AE  A++ GL V 
Sbjct: 1203 QGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIREGLQVA 1262

Query: 951  VALKLNRVVIEVDSKALFQMITSTASHCPVEVSVLLKDINKLLAQIPTTTLSWT*REANR 1130
                 +++ +E D+K + Q++          + V++ DI  LL +  +       RE N+
Sbjct: 1263 WDCNYHKLEVECDAKGVVQLLAKPLEAENHPLGVIVMDICILLTRHWSVEFLHIKREGNK 1322

Query: 1131 VADALAGHA 1157
            VA  LA  A
Sbjct: 1323 VAHCLAAEA 1331


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score =  135 bits (340), Expect = 2e-29
 Identities = 103/340 (30%), Positives = 167/340 (49%), Gaps = 3/340 (0%)
 Frame = +3

Query: 162  DELIWGANKYGLYTVKSAYNCLLR*CDP-SLVNRISIFSKIWKQKLPQKIKFFPWQGLNQ 338
            D L WG +  G +TVKSAY+ L++   P S ++R+  + ++WK   P+++K F W G++Q
Sbjct: 432  DRLSWGESLDGKFTVKSAYSSLMKDNTPRSDLSRM--YDRVWKVIAPERVKIFLWLGVHQ 489

Query: 339  VIPTSDLLRKCKFGVDKTCAFCDS-DESQLHLFIHCPFARAVWLGLNLHQKVLEPNMVDF 515
            VI T+   ++        C  C   DE+ +H+   CP    +W  +   +K         
Sbjct: 490  VIMTNMERQRRHLSDTGICQVCKGGDETIIHILRDCPAMYGIWTRIIPRRK---RGTFFT 546

Query: 516  KTWLSEILQTLW*QDDDLSITFTIGLWQIWKDRNENRFKCKQSSPVQCLFRIRRLVEDIS 695
            +T L  +   L          ++   W  WK R  N F           F +R    ++ 
Sbjct: 547  QTLLEWVYDNLGDSGKVDGCPWSCVRWG-WKWRCGNVFGVNGKCRDMVKF-VRDRASEVI 604

Query: 696  KAFCVEDQSPKLKNT-SLMVMWSFPPLGWFKLNTDGSCIGNSGPAGAGCVIRDDTGHFMA 872
            +A  VE  S K++     MV W  P  GW KLNTDG+  GN G A AG ++R   G ++ 
Sbjct: 605  QAHLVEGNSGKIRGRIERMVSWVKPAEGWLKLNTDGASKGNPGLATAGGILRQQDGSWIG 664

Query: 873  GIADSIRVGSSLLAEFYALKLGLMVVVALKLNRVVIEVDSKALFQMITSTASHCPVEVSV 1052
            G A +I + S+ LAE + +  GL +    K+ R+ +EVDS+ +   +T+  S     +S 
Sbjct: 665  GFAVNIGICSAPLAELWRVYYGLYIAWERKITRLEVEVDSELVVGFLTTWISDSH-PLSF 723

Query: 1053 LLKDINKLLAQIPTTTLSWT*REANRVADALAGHASSIAM 1172
            L++     +++     +S   REANR+AD LA +ASS+ +
Sbjct: 724  LVRLCYGFISRDWIVRISHVYREANRLADGLANYASSLPL 763


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  134 bits (338), Expect = 4e-29
 Identities = 110/386 (28%), Positives = 174/386 (45%), Gaps = 9/386 (2%)
 Frame = +3

Query: 75   WNVELVNAWWPPEYARKILSTPLALEFHDDELIWGANKYGLYTVKSAYNCLL---R*CDP 245
            WNVEL+N  + P  +  I   P+AL+   D+ +W  +K G +TV+SAY   L   R   P
Sbjct: 981  WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGP 1040

Query: 246  SLVN--RISIFSKIWKQKLPQKIKFFPWQGLNQVIPTSDLLRKCKFGVDKTCAFC-DSDE 416
            S      + ++ KIWK K+P K+K F W+ ++  +     +RK    +D  C  C + +E
Sbjct: 1041 STSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEE 1100

Query: 417  SQLHLFIHCPFARAVWL--GLNLHQKVLEPNMVDFKTWLSEILQTLW*QDDDLSITFTIG 590
            +  HL   C  +   W    L +H   +E     F+ W+  +L T   +D +    F + 
Sbjct: 1101 TTEHLIWGCDESSRAWYISPLRIHTGNIEAG--SFRIWVESLLDTH--KDTEWWALFWMI 1156

Query: 591  LWQIWKDRNENRFKCKQSSPVQCLFRIRRLVEDISKAFCVEDQSPKLKNTSLMVMWSFPP 770
             W IW  RN+  F+ K+ +  + + R  R V +  +  C      +  NT     WS PP
Sbjct: 1157 CWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEE-CAHTSPVETLNTH-ENGWSVPP 1214

Query: 771  LGWFKLNTDGSCIGNSGPAGAGCVIRDDTGH-FMAGIADSIRVGSSLLAEFYALKLGLMV 947
            +G  KLN D +   + G  G G V+RD  G   +A       +    +AE  +L+ GL V
Sbjct: 1215 VGMVKLNVDAAVFKHVG-IGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKV 1273

Query: 948  VVALKLNRVVIEVDSKALFQMITSTASHCPVEVSVLLKDINKLLAQIPTTTLSWT*REAN 1127
                    +V+E+D K LF  +   AS        ++ DI  L ++          R  N
Sbjct: 1274 AYEAGFRNLVVEMDCKKLFLQLRGKASDV-TPFGRVVDDILYLASKCSNVVFEHVKRHCN 1332

Query: 1128 RVADALAGHASSIAMDDQWWTNYIPT 1205
            +VA  LA    + AM+ + W    P+
Sbjct: 1333 KVAHLLAQMCKN-AMEKRVWLEEYPS 1357


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  133 bits (334), Expect = 1e-28
 Identities = 107/388 (27%), Positives = 178/388 (45%), Gaps = 13/388 (3%)
 Frame = +3

Query: 60   PVTRTWNVELVNAWWPPEYARKILSTPLALEFHDDELIWGANKYGLYTVKSAYNC----- 224
            P T TW+ +L++  +  E    I S P+ +E  +D L W  +  G +TVKSAY       
Sbjct: 1222 PYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEM-EDVLAWHFDARGCFTVKSAYKVQREME 1280

Query: 225  --LLR*CDPSLVNRIS----IFSKIWKQKLPQKIKFFPWQGLNQVIPTSDLLRKCKFGVD 386
                R   P + N  S     + K+WK  +P KIK F W+  +  +     L      VD
Sbjct: 1281 RRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVD 1340

Query: 387  KTCAFCDS-DESQLHLFIHCPFARAVWLGLNLHQKVLEPNMVDFKTWLSEILQTLW*QDD 563
              C  C   +E   HLF  C   + VW  LNL +     +M++ +T    +LQ+++ + +
Sbjct: 1341 TRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEEL---RSMLEQQTSGKNVLQSIYCRPE 1397

Query: 564  DLSITFTIGLWQIWKDRNENRFKCKQSSPVQCLFRIRRLVEDISKAFCVEDQSPKLKNTS 743
            +   +  + LWQ WK+RNE R      SP +    I     +  +   V+++SP+   T 
Sbjct: 1398 NERTSAIVCLWQWWKERNEVREGGIPRSPAELSHLIMSQAGEFVR-MNVKEKSPR---TG 1453

Query: 744  LMVMWSFPPLGWFKLNTDGSCIGNSGPAGAGCVIRDDTGHFM-AGIADSIRVGSSLLAEF 920
               +W  PPL + K+NTDG+   N    G G VI+D TG  + AG   +  +  +  AE 
Sbjct: 1454 ECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEV 1513

Query: 921  YALKLGLMVVVALKLNRVVIEVDSKALFQMITSTASHCPVEVSVLLKDINKLLAQIPTTT 1100
             A    +       ++R+ +E DS  L   I   + +      V+L+  + +L+   + +
Sbjct: 1514 VACAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFS 1573

Query: 1101 LSWT*REANRVADALAGHASSIAMDDQW 1184
            +S++ R  N+VA  LA +  ++     W
Sbjct: 1574 VSYSPRSCNKVAHELAAYGCNLQTVSSW 1601


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score =  133 bits (334), Expect = 1e-28
 Identities = 108/388 (27%), Positives = 178/388 (45%), Gaps = 13/388 (3%)
 Frame = +3

Query: 60   PVTRTWNVELVNAWWPPEYARKILSTPLALEFHDDELIWGANKYGLYTVKSAYNC----- 224
            P T TW+ +L++  +  E    I S P+ +E  +D L W  +  G +TVKSAY       
Sbjct: 162  PYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEM-EDVLAWHFDARGCFTVKSAYKVQREME 220

Query: 225  --LLR*CDPSLVNRIS----IFSKIWKQKLPQKIKFFPWQGLNQVIPTSDLLRKCKFGVD 386
                R   P + N  S     + K+WK  +P KIK F W+  +  +     L+     VD
Sbjct: 221  RRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVD 280

Query: 387  KTCAFCDS-DESQLHLFIHCPFARAVWLGLNLHQKVLEPNMVDFKTWLSEILQTLW*QDD 563
              C  C   +E   HLF  C   + VW  LNL +     +M++ +T    +LQ+++ + +
Sbjct: 281  TRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEEL---RSMLEQQTSGKNVLQSIYCRPE 337

Query: 564  DLSITFTIGLWQIWKDRNENRFKCKQSSPVQCLFRIRRLVEDISKAFCVEDQSPKLKNTS 743
                +  + LWQ WK+RNE R      SP +    I     +  +   V+++SP+   T 
Sbjct: 338  IERTSAIVCLWQWWKERNEVREGGIPRSPAELSHLIMSQAGEFVR-MNVKEKSPR---TG 393

Query: 744  LMVMWSFPPLGWFKLNTDGSCIGNSGPAGAGCVIRDDTGHFM-AGIADSIRVGSSLLAEF 920
               +W  PPL + K+NTDG+   N    G G VIRD TG  + AG   +  +  +  AE 
Sbjct: 394  ECAVWRRPPLNFVKINTDGAYSSNMKQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEV 453

Query: 921  YALKLGLMVVVALKLNRVVIEVDSKALFQMITSTASHCPVEVSVLLKDINKLLAQIPTTT 1100
             A    +       ++R+ +E DS  L   I   + +      V+L+  + +L+   + +
Sbjct: 454  VACAAAIKTASERGMSRIELETDSMMLRYAIQDNSFNLSSLGGVILEIKHIILSCFHSFS 513

Query: 1101 LSWT*REANRVADALAGHASSIAMDDQW 1184
            +S++ R  N+VA  LA +  ++     W
Sbjct: 514  VSYSPRSCNKVAHELAAYGCNLQTVSSW 541