BLASTX nr result

ID: Coptis25_contig00029385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029385
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group] g...    73   3e-11
ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [S...    73   3e-11
gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indi...    73   3e-11
ref|XP_002297989.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002279490.2| PREDICTED: translation initiation factor IF-...    72   6e-11

>ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group]
           gi|50725362|dbj|BAD34434.1| putative translation
           initiation factor IF-2 [Oryza sativa Japonica Group]
           gi|50726238|dbj|BAD33814.1| putative translation
           initiation factor IF-2 [Oryza sativa Japonica Group]
           gi|113631901|dbj|BAF25582.1| Os09g0515500 [Oryza sativa
           Japonica Group] gi|125606325|gb|EAZ45361.1| hypothetical
           protein OsJ_30008 [Oryza sativa Japonica Group]
           gi|215686824|dbj|BAG89674.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 716

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +2

Query: 2   QTSVAAKEAGGITQHLGAFVVDMPSGASITILDTPGH 112
           QTSVAAKEAGGITQH+GAFVV+MPSGASIT LDTPGH
Sbjct: 219 QTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGH 255


>ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [Sorghum bicolor]
           gi|241937724|gb|EES10869.1| hypothetical protein
           SORBIDRAFT_06g017820 [Sorghum bicolor]
          Length = 685

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +2

Query: 2   QTSVAAKEAGGITQHLGAFVVDMPSGASITILDTPGH 112
           QTSVAAKEAGGITQH+GAFVV+MPSGASIT LDTPGH
Sbjct: 188 QTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGH 224


>gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indica Group]
          Length = 716

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/37 (91%), Positives = 36/37 (97%)
 Frame = +2

Query: 2   QTSVAAKEAGGITQHLGAFVVDMPSGASITILDTPGH 112
           QTSVAAKEAGGITQH+GAFVV+MPSGASIT LDTPGH
Sbjct: 219 QTSVAAKEAGGITQHIGAFVVEMPSGASITFLDTPGH 255


>ref|XP_002297989.1| predicted protein [Populus trichocarpa] gi|222845247|gb|EEE82794.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/37 (94%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   QTSVAAKEAGGITQHLGAFVVDMPSGASITILDTPGH 112
           QTSVAAKEAGGITQHLGAFVV MPSGASIT LDTPGH
Sbjct: 88  QTSVAAKEAGGITQHLGAFVVRMPSGASITFLDTPGH 124


>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
           gi|296089697|emb|CBI39516.3| unnamed protein product
           [Vitis vinifera]
          Length = 725

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/37 (91%), Positives = 35/37 (94%)
 Frame = +2

Query: 2   QTSVAAKEAGGITQHLGAFVVDMPSGASITILDTPGH 112
           QTSVAA+EAGGITQHLGAFVV MPSGASIT LDTPGH
Sbjct: 228 QTSVAAREAGGITQHLGAFVVSMPSGASITFLDTPGH 264


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