BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029384
         (1085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]   317   4e-84
ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like...   315   9e-84
ref|XP_002510430.1| transcription factor, putative [Ricinus comm...   275   2e-71
ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thali...   221   2e-55
ref|XP_002890742.1| hypothetical protein ARALYDRAFT_472970 [Arab...   217   5e-54

>emb|CAN61992.1| hypothetical protein VITISV_030445 [Vitis vinifera]
          Length = 512

 Score =  317 bits (811), Expect = 4e-84
 Identities = 175/296 (59%), Positives = 215/296 (72%), Gaps = 14/296 (4%)
 Frame = -2

Query: 1081 LPSTSYIKERRDLNDLSEKILLKTFSSGCQLNDLQ--DGTLYSNSQS---SVRGTATSTR 917
            LP TSYI+ + DLNDLSEK+LLK+FSSGCQ+N LQ   G   +N+QS      G A  +R
Sbjct: 158  LPPTSYIRSK-DLNDLSEKLLLKSFSSGCQINGLQLSAGEFXANAQSCNTGFGGVAIPSR 216

Query: 916  GNFSQIFPSANVSTTNSPFSS------MNMQVLDLLTSTKSGGGFGQLRHNNLGLFKETP 755
            G+FSQIFP+ N+S  + P S+      MN+Q LDLLTS +  G F Q  HNNLGLFK++ 
Sbjct: 217  GHFSQIFPTINISNLSQPSSTISSSLDMNLQALDLLTSARFSGTFSQPSHNNLGLFKDSL 276

Query: 754  SFDLDHMKESSHWLTSSSNKVSSFANEVTETKRSSSVMEPKASNTASKKPRFESRTSLAP 575
            SF LDH+++S++  ++SS+K+S F N V E KR SS +EPKA+    KK R ESR S  P
Sbjct: 277  SFGLDHLQZSTNRPSNSSSKISPFTNGVAEVKRPSSFLEPKATQATPKKSRLESRASCPP 336

Query: 574  FKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNNS 395
             KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS  N S
Sbjct: 337  IKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKS 396

Query: 394  ARSIHKNLKEGD-DEDTKRDLRSRGLCLVPMSCISYIASDNIGG--WLGSDYGGRT 236
            + S+     +G+  E+ +RDLRSRGLCLVP+SC+SY+ +D  GG  W    +GG T
Sbjct: 397  SISMQGGSADGEGSEEPRRDLRSRGLCLVPLSCMSYVTTDCGGGGVWPPPSFGGGT 452


>ref|XP_002281118.2| PREDICTED: transcription factor bHLH110-like [Vitis vinifera]
            gi|302142540|emb|CBI19743.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  315 bits (808), Expect = 9e-84
 Identities = 175/296 (59%), Positives = 215/296 (72%), Gaps = 14/296 (4%)
 Frame = -2

Query: 1081 LPSTSYIKERRDLNDLSEKILLKTFSSGCQLNDLQ--DGTLYSNSQS---SVRGTATSTR 917
            LP TSYI+ + DLNDLSEK+LLK+FSSGCQ+N LQ   G   +N+QS      G A  +R
Sbjct: 133  LPPTSYIRSK-DLNDLSEKLLLKSFSSGCQINGLQLSAGEFCANAQSCNTGFGGVAIPSR 191

Query: 916  GNFSQIFPSANVSTTNSPFSS------MNMQVLDLLTSTKSGGGFGQLRHNNLGLFKETP 755
            G+FSQIFP+ N+S  + P S+      MN+Q LDLLTS +  G F Q  HNNLGLFK++ 
Sbjct: 192  GHFSQIFPTINISNLSQPSSTISSSLDMNLQALDLLTSARFSGTFSQPSHNNLGLFKDSL 251

Query: 754  SFDLDHMKESSHWLTSSSNKVSSFANEVTETKRSSSVMEPKASNTASKKPRFESRTSLAP 575
            SF LDH+++S++  ++SS+K+S F N V E KR SS +EPKA+    KK R ESR S  P
Sbjct: 252  SFGLDHLQQSTNRPSNSSSKISPFTNGVAEVKRPSSFLEPKATQATPKKSRLESRASCPP 311

Query: 574  FKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNNS 395
             KVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS  N S
Sbjct: 312  IKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNKS 371

Query: 394  ARSIHKNLKEGD-DEDTKRDLRSRGLCLVPMSCISYIASDNIGG--WLGSDYGGRT 236
            + S+     +G+  E+ +RDLRSRGLCLVP+SC+SY+ +D  GG  W    +GG T
Sbjct: 372  SISMQGGSADGEGSEEPRRDLRSRGLCLVPLSCMSYVTTDCGGGGVWPPPSFGGGT 427


>ref|XP_002510430.1| transcription factor, putative [Ricinus communis]
            gi|223551131|gb|EEF52617.1| transcription factor,
            putative [Ricinus communis]
          Length = 436

 Score =  275 bits (702), Expect = 2e-71
 Identities = 169/300 (56%), Positives = 205/300 (68%), Gaps = 18/300 (6%)
 Frame = -2

Query: 1081 LPSTSYIK-ERRDLNDLSEKILLKTFSSGCQLNDLQDGTLYSNSQ-SSVRGTATSTRGNF 908
            L STSYIK E++ + DLSEK+LLKT SSG  +N       +S S   S  G+   +RGNF
Sbjct: 143  LSSTSYIKDEQKYMTDLSEKLLLKTISSGFPINGHPQ---FSPSLICSSFGSPIPSRGNF 199

Query: 907  SQIFPSANVSTTNSPFS-------SMNMQVLDLLTSTKSGGGFGQLRHNNLGLFKETPSF 749
            SQI+PS N+S  N   S        MN+Q LDLLTST+ GG FGQ  H+NLG++K+  S+
Sbjct: 200  SQIYPSINISNLNRSTSPSISGSFDMNLQALDLLTSTRFGGSFGQPSHDNLGIYKDNISY 259

Query: 748  DLDHMKESSHWLTSSSNKVSSFAN-EVTETKR-SSSVMEPKAS-NTASKKPRFESRTSLA 578
            D D M+  +H  + S +K+SS    E TE KR  SS+MEPKA+   A KK R E+R S  
Sbjct: 260  DFDRMQ--NHMPSCSHSKISSITTKETTEAKRPGSSLMEPKATLQAAPKKSRLETRASCP 317

Query: 577  PFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVPYMKSLCNN 398
            PFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQ+QVETLSVPYMKS  N 
Sbjct: 318  PFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRNK 377

Query: 397  SARSIHK--NLKEGDDEDTKRDLRSRGLCLVPMSCISYIASDNIGG----WLGSDYGGRT 236
            S+R+      ++EG+ E  K+DLRSRGLCLVP+SC+SY+  D  G     W    +GG T
Sbjct: 378  SSRNSQSGPTVEEGNFE-PKKDLRSRGLCLVPLSCMSYVTGDGGGSSGNIWPPPSFGGGT 436


>ref|NP_174087.1| transcription factor bHLH110 [Arabidopsis thaliana]
            gi|218563530|sp|Q9SFZ3.2|BH110_ARATH RecName:
            Full=Transcription factor bHLH110; AltName: Full=Basic
            helix-loop-helix protein 110; Short=AtbHLH110; Short=bHLH
            110; AltName: Full=Transcription factor EN 59; AltName:
            Full=bHLH transcription factor bHLH110
            gi|332192739|gb|AEE30860.1| transcription factor bHLH110
            [Arabidopsis thaliana]
          Length = 453

 Score =  221 bits (564), Expect = 2e-55
 Identities = 145/302 (48%), Positives = 195/302 (64%), Gaps = 27/302 (8%)
 Frame = -2

Query: 1072 TSYIKERRDLNDLSEKILLKTFSSGCQLNDLQDGTLYSNSQSSVRGTATSTRGNFSQIFP 893
            T+Y+K      D +EK+LLK+ SSG  +N     +L S+S SS   ++ S RGNFSQI+P
Sbjct: 145  TNYLKINEH-KDYTEKLLLKSMSSGFPINGDYGSSLPSSSSSS-SPSSQSHRGNFSQIYP 202

Query: 892  SANVSTTNS--------------PFSSMNMQVLD--LLTSTKSGGGFGQLRHNNLGLFKE 761
            S N+S+ +               PF  +NMQV D  L         F     ++LG+ + 
Sbjct: 203  SVNISSLSESRKMSMDDMSNISRPFD-INMQVFDGRLFEGNVLVPPFNAQEISSLGMSRG 261

Query: 760  T-PSFDLD---HMKESSHWLTSS-SNKVSSFANE--VTETKRSSSVMEPKASNTASKKPR 602
            + PSF L    H++++   L+SS ++++  F+NE   +E KR + +M  KA   ASKKPR
Sbjct: 262  SLPSFGLPFHHHLQQTLPHLSSSPTHQMEMFSNEPQTSEGKRHNFLMATKAGENASKKPR 321

Query: 601  FESRTSLAPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVP 422
             ESR+S  PFKVRKEKLGDRIAALQQLV+PFGKTDTASVLMEAIGYIKFLQ Q+ETLSVP
Sbjct: 322  VESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVP 381

Query: 421  YMKSLCN--NSARSIHKNLKEGDDEDTKRDLRSRGLCLVPMSCISYIASD--NIGGWLGS 254
            YM++  N    A  +    +EGD+E+T RDLRSRGLCLVP+SC++Y+  D  + GG +G+
Sbjct: 382  YMRASRNRPGKASQLVSQSQEGDEEET-RDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGT 440

Query: 253  DY 248
             +
Sbjct: 441  GF 442


>ref|XP_002890742.1| hypothetical protein ARALYDRAFT_472970 [Arabidopsis lyrata subsp.
            lyrata] gi|297336584|gb|EFH67001.1| hypothetical protein
            ARALYDRAFT_472970 [Arabidopsis lyrata subsp. lyrata]
          Length = 449

 Score =  217 bits (552), Expect = 5e-54
 Identities = 145/313 (46%), Positives = 192/313 (61%), Gaps = 34/313 (10%)
 Frame = -2

Query: 1072 TSYIKERRDLNDLSEKILLKTFSSGCQLNDLQDGTLYSNSQSSVRGTATSTRGNFSQIFP 893
            T+Y+K      D +EK+LLK+ SSG  ++     +L S+S SS   ++ S RGNFSQI+P
Sbjct: 141  TNYLKINEH-KDYTEKLLLKSMSSGFPISGDYCSSLPSSSSSS-SPSSQSHRGNFSQIYP 198

Query: 892  SANVSTTNS--------------PFSSMNMQVLD--LLTSTKSGGGFGQLRHNNLGLFKE 761
            S N+S+ +               PF  MNMQV D  L               +NLG+ + 
Sbjct: 199  SVNISSLSESRKMSMDDMSNIPRPFD-MNMQVFDGRLFEGNVLVPPLNSQEISNLGMSRG 257

Query: 760  T-PSFDLD---HMKES-SHWLTSSSNKVSSFANE--VTETKRSSSVMEPKASNTASKKPR 602
            + P F L    H++++  H  +S ++++  F+NE   +E KR + +M  K    ASKKPR
Sbjct: 258  SFPPFGLPFHHHLQQTLPHPSSSPTHQMEMFSNESQTSEGKRHNFLMATKVGENASKKPR 317

Query: 601  FESRTSLAPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQDQVETLSVP 422
             ESR+S  PFKVRKEKLGDRIAALQQLV+PFGKTDTASVLMEAIGYIKFLQ Q+ETLSVP
Sbjct: 318  VESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQSQIETLSVP 377

Query: 421  YMKSLCNNS--ARSIHKNLKEGDDEDTKRDLRSRGLCLVPMSCISYIASDNIGGWLG--- 257
            YM++  N +  A  +    +EGD+E+T RDLRSRGLCLVP+SC++Y+  D   G  G   
Sbjct: 378  YMRASRNRTGKASQLGSQSQEGDEEET-RDLRSRGLCLVPLSCMTYVTGDGGDGGDGVGS 436

Query: 256  ------SDYGGRT 236
                    +GGRT
Sbjct: 437  GFWPTPPGFGGRT 449