BLASTX nr result

ID: Coptis25_contig00029368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029368
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33793.3| unnamed protein product [Vitis vinifera]              198   7e-49
ref|XP_003533452.1| PREDICTED: uncharacterized protein LOC100817...   186   3e-45
ref|XP_002518999.1| conserved hypothetical protein [Ricinus comm...   184   2e-44
ref|XP_004136401.1| PREDICTED: uncharacterized protein LOC101220...   176   4e-42
ref|XP_002303449.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40

>emb|CBI33793.3| unnamed protein product [Vitis vinifera]
          Length = 341

 Score =  198 bits (504), Expect = 7e-49
 Identities = 106/202 (52%), Positives = 141/202 (69%), Gaps = 1/202 (0%)
 Frame = -1

Query: 604 VQKQAVRLLYLLLNCPKILVSFCSACNDD-PSSEATDDATTDGLTFQVFSNILEGLAECV 428
           VQKQA+ LLYLLLN P +LV FCS C ++   +E  ++   +   F+ FS IL+GLA CV
Sbjct: 122 VQKQAMHLLYLLLNSPNLLVIFCSGCKEEMKGAEDENNDAKNASAFREFSVILDGLANCV 181

Query: 427 KCRGRGTQELKLRTLAIVVLAFVASSGKLGFEVFLNPKMSNGANFLELILQALASELDAE 248
            C G GTQELKLR  AI++LAF+AS GK GFE+ L  K+S   NFL LILQ L SE+D E
Sbjct: 182 ACCGNGTQELKLRRNAIIMLAFLAS-GKSGFEILLGHKLSKQTNFLVLILQLLVSEMDVE 240

Query: 247 AVESAKSAETCRERNLLVREALILLNRLASSPTCSSAIIHALTSSRDMISLTVDVVSRTS 68
             +S +  E  +ER LL+REALI LNRL S+P+ S+A++  LTSSRD+ SLT+D+ +R S
Sbjct: 241 VGKSTEPPEIFKERTLLIREALIFLNRLVSNPSYSTAVLRVLTSSRDVASLTIDIANRLS 300

Query: 67  RKGRAWWKSDSTKKRKAEDEIV 2
           R G+  W+S++  ++  E EIV
Sbjct: 301 RVGQGHWQSENAARQMRESEIV 322


>ref|XP_003533452.1| PREDICTED: uncharacterized protein LOC100817091 [Glycine max]
          Length = 698

 Score =  186 bits (473), Expect = 3e-45
 Identities = 109/221 (49%), Positives = 142/221 (64%), Gaps = 2/221 (0%)
 Frame = -1

Query: 658  RLLFEXXXXXXXXXXXLHVQKQAVRLLYLLLNCPKILVSFCSACNDDPSSEATDDATTDG 479
            +++FE           L V+K A+RLLYL+LNCPK+L +FC  C +   S A DD     
Sbjct: 462  KIVFETISELLKKDAGLSVKKHALRLLYLVLNCPKLLAAFCCGCKERDDSSAMDDNDL-A 520

Query: 478  LTFQVFSNILEGLAECV-KCRGRGTQELKLRTLAIVVLAFVASSGKLGFEVFLNPKMS-N 305
            L FQ F  IL+GL++CV  CRG G  ELK+   AI+VLAF+ASSG+ GFE+F+  K+S  
Sbjct: 521  LHFQNFKIILQGLSDCVASCRG-GILELKVSRNAILVLAFLASSGQPGFEIFVGHKLSCR 579

Query: 304  GANFLELILQALASELDAEAVESAKSAETCRERNLLVREALILLNRLASSPTCSSAIIHA 125
            G N+L LILQ L SE+D EA    +  E  RER  L+RE LILLNRL SSP+ S+ ++H 
Sbjct: 580  GVNYLMLILQLLVSEMDLEAGAHGQQPEIFRERTFLIRETLILLNRLVSSPSYSATVLHG 639

Query: 124  LTSSRDMISLTVDVVSRTSRKGRAWWKSDSTKKRKAEDEIV 2
            LT++RDM  LT+DV SR S+KG+   + DS      E EIV
Sbjct: 640  LTTNRDMAGLTIDVASRLSQKGKKNEQQDSMVNHIRETEIV 680


>ref|XP_002518999.1| conserved hypothetical protein [Ricinus communis]
            gi|223541986|gb|EEF43532.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 651

 Score =  184 bits (466), Expect = 2e-44
 Identities = 99/204 (48%), Positives = 142/204 (69%), Gaps = 2/204 (0%)
 Frame = -1

Query: 607  HVQKQAVRLLYLLLNCPKILVSFCSACN--DDPSSEATDDATTDGLTFQVFSNILEGLAE 434
            +VQK+++ LL+LLLNCPK+L  F S C   D  +++A + +T  G     FS ILEGLA+
Sbjct: 434  YVQKESLDLLFLLLNCPKLLSVFHSGCKEGDIAANDANNASTRKG-----FSAILEGLAD 488

Query: 433  CVKCRGRGTQELKLRTLAIVVLAFVASSGKLGFEVFLNPKMSNGANFLELILQALASELD 254
            C+ C G   ++++LR  A+++LAF+A+SGK GFE+ +N K+  G NFL LILQ L SE+D
Sbjct: 489  CIACSGNDIEDIQLRKRAVIMLAFLAASGKSGFEILVNHKLHGGKNFLMLILQVLISEMD 548

Query: 253  AEAVESAKSAETCRERNLLVREALILLNRLASSPTCSSAIIHALTSSRDMISLTVDVVSR 74
             E   S++SAE+ + R LL+RE LILLNRL S+P  S+ ++  LT+SR+M SLT+D+V+R
Sbjct: 549  VEMSVSSESAESIKARVLLMREVLILLNRLVSNPGYSAVVLQVLTASREMASLTIDIVTR 608

Query: 73   TSRKGRAWWKSDSTKKRKAEDEIV 2
             SRK +    SDS  ++  E EIV
Sbjct: 609  LSRKDQILRLSDSITRQMRESEIV 632


>ref|XP_004136401.1| PREDICTED: uncharacterized protein LOC101220265 [Cucumis sativus]
          Length = 732

 Score =  176 bits (446), Expect = 4e-42
 Identities = 96/218 (44%), Positives = 132/218 (60%)
 Frame = -1

Query: 655  LLFEXXXXXXXXXXXLHVQKQAVRLLYLLLNCPKILVSFCSACNDDPSSEATDDATTDGL 476
            LLF+             +QK AVRLL+L+LNCP   V+FCS C +  ++E  ++      
Sbjct: 497  LLFDSVVEFIRKESGSAIQKHAVRLLFLILNCPTFFVAFCSGCKEAEANEVGNENVRSAG 556

Query: 475  TFQVFSNILEGLAECVKCRGRGTQELKLRTLAIVVLAFVASSGKLGFEVFLNPKMSNGAN 296
             FQ F  IL GLA+C+ C G G +ELKLR   +++LAF+ASSGK GFE+  + K+   +N
Sbjct: 557  GFQKFQTILHGLADCLTCSGNGIEELKLRKNTVLLLAFLASSGKAGFEILTSNKLYTYSN 616

Query: 295  FLELILQALASELDAEAVESAKSAETCRERNLLVREALILLNRLASSPTCSSAIIHALTS 116
            FL LILQ +ASEL+ E     +  E   ER LL+RE LIL NRLAS    S  I+  +T+
Sbjct: 617  FLTLILQVVASELEQEKT-VPEPMENLEERALLLREVLILFNRLASHSLYSMTILRVVTN 675

Query: 115  SRDMISLTVDVVSRTSRKGRAWWKSDSTKKRKAEDEIV 2
            SRDM +LT+DV ++  RK     + DS K++  E E+V
Sbjct: 676  SRDMATLTIDVTNKLCRKNNRNGQLDSKKRKMRESEVV 713


>ref|XP_002303449.1| predicted protein [Populus trichocarpa] gi|222840881|gb|EEE78428.1|
            predicted protein [Populus trichocarpa]
          Length = 805

 Score =  169 bits (429), Expect = 3e-40
 Identities = 98/217 (45%), Positives = 136/217 (62%)
 Frame = -1

Query: 652  LFEXXXXXXXXXXXLHVQKQAVRLLYLLLNCPKILVSFCSACNDDPSSEATDDATTDGLT 473
            +FE             VQK+A+ LL+LLLNC K+L  FCS C +   S++T+D      T
Sbjct: 567  IFESIAQLLKREAGSRVQKEALHLLFLLLNCSKLLSIFCSGCKEAEISDSTNDKKITS-T 625

Query: 472  FQVFSNILEGLAECVKCRGRGTQELKLRTLAIVVLAFVASSGKLGFEVFLNPKMSNGANF 293
             + FS+ LEGLAEC+ C G   Q+++LR  AI++LAF+ASSGK GFE+ +  K+    NF
Sbjct: 626  PKGFSSTLEGLAECIACSGYSLQDIELRKRAIIMLAFLASSGKPGFEIMVTCKLPGETNF 685

Query: 292  LELILQALASELDAEAVESAKSAETCRERNLLVREALILLNRLASSPTCSSAIIHALTSS 113
            L LILQ L SE+D EA  SA+   + + R LL+REALILLNRL S+P  S+  +  LT+ 
Sbjct: 686  LMLILQVLVSEMDVEA--SAEPERSIKARTLLIREALILLNRLVSNPGYSAIALRVLTAR 743

Query: 112  RDMISLTVDVVSRTSRKGRAWWKSDSTKKRKAEDEIV 2
            RDM  LT+D+ +R S++ +   +SD  +    E EIV
Sbjct: 744  RDMAILTIDIANRLSQEDQRHRQSD-VQGHVKESEIV 779


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