BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029355
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containi...   201   3e-49
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]   201   3e-49
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi...   200   4e-49
emb|CBI33142.3| unnamed protein product [Vitis vinifera]              200   4e-49
ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containi...   194   3e-47

>ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
            mitochondrial-like, partial [Vitis vinifera]
          Length = 317

 Score =  201 bits (511), Expect = 3e-49
 Identities = 94/144 (65%), Positives = 115/144 (79%)
 Frame = -2

Query: 1075 IALRAEHYACMVDILCRAGQLEKACMIILGMPFEADAGVWGALLAACRVHSNVELGELAA 896
            I  R EH+AC+VDIL R GQ+EKA  II  MPFEAD G+WGALLAAC VH NV+LGELAA
Sbjct: 159  IVARPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAA 218

Query: 895  TRLIELEPQNSGTYIMMSNIYAAVGMWNKVTSMRSLMKVQGVKKQPGYSWIEVGSRLHMF 716
             +++ELEPQNSG Y+++SNIYAA GMW +VT +R LM+ QGVKKQP YSW+E+ +++H F
Sbjct: 219  KKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFF 278

Query: 715  LGGDISHPEIDKIYSELKYILLQM 644
            LG D SHPEI +I  ELK + LQM
Sbjct: 279  LGDDASHPEIHRIRLELKGMKLQM 302


>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
          Length = 1301

 Score =  201 bits (511), Expect = 3e-49
 Identities = 94/144 (65%), Positives = 115/144 (79%)
 Frame = -2

Query: 1075 IALRAEHYACMVDILCRAGQLEKACMIILGMPFEADAGVWGALLAACRVHSNVELGELAA 896
            I  R EH+AC+VDIL R GQ+EKA  II  MPFEAD G+WGALLAAC VH NV+LGELAA
Sbjct: 432  IVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAA 491

Query: 895  TRLIELEPQNSGTYIMMSNIYAAVGMWNKVTSMRSLMKVQGVKKQPGYSWIEVGSRLHMF 716
             +++ELEPQNSG Y+++SNIYAA GMW +VT +R LM+ QGVKKQP YSW+E+ +++H F
Sbjct: 492  KKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFF 551

Query: 715  LGGDISHPEIDKIYSELKYILLQM 644
            LG D SHPEI +I  ELK + LQM
Sbjct: 552  LGDDASHPEIHRIRLELKGMKLQM 575


>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 590

 Score =  200 bits (509), Expect = 4e-49
 Identities = 94/144 (65%), Positives = 115/144 (79%)
 Frame = -2

Query: 1075 IALRAEHYACMVDILCRAGQLEKACMIILGMPFEADAGVWGALLAACRVHSNVELGELAA 896
            I  R EH+AC+VDIL R GQ+EKA  II  MPFEAD G+WGALLAAC VH NV+LGELAA
Sbjct: 432  IVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAA 491

Query: 895  TRLIELEPQNSGTYIMMSNIYAAVGMWNKVTSMRSLMKVQGVKKQPGYSWIEVGSRLHMF 716
             +++ELEPQNSG Y+++SNIYAA GMW +VT +R LM+ QGVKKQP YSW+E+ +++H F
Sbjct: 492  KKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFF 551

Query: 715  LGGDISHPEIDKIYSELKYILLQM 644
            LG D SHPEI +I  ELK + LQM
Sbjct: 552  LGDDASHPEIHRIRLELKGMKLQM 575


>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
          Length = 1198

 Score =  200 bits (509), Expect = 4e-49
 Identities = 94/144 (65%), Positives = 115/144 (79%)
 Frame = -2

Query: 1075 IALRAEHYACMVDILCRAGQLEKACMIILGMPFEADAGVWGALLAACRVHSNVELGELAA 896
            I  R EH+AC+VDIL R GQ+EKA  II  MPFEAD G+WGALLAAC VH NV+LGELAA
Sbjct: 360  IVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAA 419

Query: 895  TRLIELEPQNSGTYIMMSNIYAAVGMWNKVTSMRSLMKVQGVKKQPGYSWIEVGSRLHMF 716
             +++ELEPQNSG Y+++SNIYAA GMW +VT +R LM+ QGVKKQP YSW+E+ +++H F
Sbjct: 420  KKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYSWMEIDNKVHFF 479

Query: 715  LGGDISHPEIDKIYSELKYILLQM 644
            LG D SHPEI +I  ELK + LQM
Sbjct: 480  LGDDASHPEIHRIRLELKGMKLQM 503


>ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 579

 Score =  194 bits (493), Expect = 3e-47
 Identities = 89/150 (59%), Positives = 117/150 (78%)
 Frame = -2

Query: 1087 NDHGIALRAEHYACMVDILCRAGQLEKACMIILGMPFEADAGVWGALLAACRVHSNVELG 908
            +++GI  R+EHYAC+VD++ RAGQL++AC II  MPF+AD+ +WGA+LAAC VH NVELG
Sbjct: 411  DNYGIPPRSEHYACLVDVMSRAGQLQRACKIINEMPFKADSSIWGAVLAACSVHLNVELG 470

Query: 907  ELAATRLIELEPQNSGTYIMMSNIYAAVGMWNKVTSMRSLMKVQGVKKQPGYSWIEVGSR 728
            ELAA R++ L+P NSG Y+M+SNIYAA G W  V  +R LMK QGVKKQ  YSW+++G++
Sbjct: 471  ELAARRILNLDPFNSGAYVMLSNIYAAAGKWKDVHRIRVLMKEQGVKKQTAYSWLQIGNK 530

Query: 727  LHMFLGGDISHPEIDKIYSELKYILLQMKV 638
             H F+GGD SHP I+ I+  L+ I L MKV
Sbjct: 531  THYFVGGDPSHPNINDIHVALRRITLHMKV 560