BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029315
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540568.1| PREDICTED: probable polygalacturonase At3g15...   135   1e-29
ref|XP_003545181.1| PREDICTED: probable polygalacturonase At3g15...   134   2e-29
ref|XP_002887842.1| hypothetical protein ARALYDRAFT_477239 [Arab...   134   3e-29
gb|AAD55489.1|AC009322_29 Similar to polygalacturonases [Arabido...   133   5e-29
ref|NP_565232.1| putative polygalacturonase [Arabidopsis thalian...   133   5e-29

>ref|XP_003540568.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
          Length = 402

 Score =  135 bits (340), Expect = 1e-29
 Identities = 71/162 (43%), Positives = 94/162 (58%)
 Frame = +1

Query: 196 GTILSPKDTETWDRIDSSKWLAFRRVTGLIVYGYGTIDGWGTXXXXXXXXXXHSKDCTKM 375
           G +++PK TE W   DSSKW+ F  V GLI+ G G IDG G+            K C++ 
Sbjct: 98  GDVVAPKSTEAWKGQDSSKWIDFSNVDGLIIDGGGQIDGSGSVWWNSCKV----KSCSR- 152

Query: 376 DPTAIKFIFCSNSYLKDLHFINSANTHIGIRQSEWFHITNLKISALKTSPNTDGIHIDRS 555
            PTA+    C+N  L     +NSA  HI I  S   HI N+ I+A + SPNTDGI + +S
Sbjct: 153 -PTALSIHNCNNLQLTGTRHLNSARNHISINNSNHTHIFNVTITAPQDSPNTDGIDVSQS 211

Query: 556 KHVFIDRSSIRSGDDCISIGDHTSDIRINNINCGPGHGIR*G 681
            ++ I RS+I +GDDCI++   TS + I  I CGPGHGI  G
Sbjct: 212 SYILIQRSTIATGDDCIAMNSGTSYVNITGITCGPGHGISVG 253


>ref|XP_003545181.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
          Length = 402

 Score =  134 bits (338), Expect = 2e-29
 Identities = 71/162 (43%), Positives = 94/162 (58%)
 Frame = +1

Query: 196 GTILSPKDTETWDRIDSSKWLAFRRVTGLIVYGYGTIDGWGTXXXXXXXXXXHSKDCTKM 375
           G +++PK TE W   DSSKW+ F  V GLI+ G G IDG G+            K C++ 
Sbjct: 98  GDVVAPKSTEAWKGQDSSKWIDFSNVDGLIIDGGGQIDGSGSVWWNSCKV----KSCSR- 152

Query: 376 DPTAIKFIFCSNSYLKDLHFINSANTHIGIRQSEWFHITNLKISALKTSPNTDGIHIDRS 555
            PTA+    C+N  L     +NSA  HI I  S   HI N+ I+A + SPNTDGI + +S
Sbjct: 153 -PTALSIQNCNNLQLTGTRHLNSARNHISINNSNHTHIFNVTITAPQDSPNTDGIDVSQS 211

Query: 556 KHVFIDRSSIRSGDDCISIGDHTSDIRINNINCGPGHGIR*G 681
            ++ I RS+I +GDDCI++   TS + I  I CGPGHGI  G
Sbjct: 212 SYILIQRSTIATGDDCIAMKSGTSYVNITGITCGPGHGISVG 253


>ref|XP_002887842.1| hypothetical protein ARALYDRAFT_477239 [Arabidopsis lyrata subsp.
           lyrata] gi|297333683|gb|EFH64101.1| hypothetical protein
           ARALYDRAFT_477239 [Arabidopsis lyrata subsp. lyrata]
          Length = 444

 Score =  134 bits (337), Expect = 3e-29
 Identities = 71/172 (41%), Positives = 101/172 (58%), Gaps = 4/172 (2%)
 Frame = +1

Query: 178 CRAK----ILGTILSPKDTETWDRIDSSKWLAFRRVTGLIVYGYGTIDGWGTXXXXXXXX 345
           C+A+    I GTI++P D + W+ ++  KWL F  ++ L V G GT++G G         
Sbjct: 107 CKARLTLQISGTIIAPNDPDAWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWTRSCK 166

Query: 346 XXHSKDCTKMDPTAIKFIFCSNSYLKDLHFINSANTHIGIRQSEWFHITNLKISALKTSP 525
             HS  C +  PTAI F  C N  +++L+ I+S   HI         I+ LK+ A  TSP
Sbjct: 167 HNHSNPC-RGAPTAITFHKCKNMRVENLNVIDSQQMHIAFTSCRRVAISGLKVIAPATSP 225

Query: 526 NTDGIHIDRSKHVFIDRSSIRSGDDCISIGDHTSDIRINNINCGPGHGIR*G 681
           NTDGIHI  S+ + ID +++ +GDDC+SI  ++S I I+NI CGPGHGI  G
Sbjct: 226 NTDGIHISVSRGIVIDNTTVSTGDDCVSIVKNSSQISISNIICGPGHGISIG 277


>gb|AAD55489.1|AC009322_29 Similar to polygalacturonases [Arabidopsis thaliana]
          Length = 459

 Score =  133 bits (335), Expect = 5e-29
 Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
 Frame = +1

Query: 178 CRAK----ILGTILSPKDTETWDRIDSSKWLAFRRVTGLIVYGYGTIDGWGTXXXXXXXX 345
           C+A+    I GTI++P D + W+ ++  KWL F  ++ L V G GT++G G         
Sbjct: 107 CKARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCK 166

Query: 346 XXHSKDCTKMDPTAIKFIFCSNSYLKDLHFINSANTHIGIRQSEWFHITNLKISALKTSP 525
             HS  C +  PTA+ F  C N  +++L+ I+S   HI +       I+ LK+ A  TSP
Sbjct: 167 HNHSNPC-RGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSP 225

Query: 526 NTDGIHIDRSKHVFIDRSSIRSGDDCISIGDHTSDIRINNINCGPGHGIR*G 681
           NTDGIHI  S+ + ID +++ +GDDCISI  +++ I I+NI CGPGHGI  G
Sbjct: 226 NTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIG 277


>ref|NP_565232.1| putative polygalacturonase [Arabidopsis thaliana]
           gi|75332048|sp|Q94AJ5.1|PGLR5_ARATH RecName:
           Full=Probable polygalacturonase At1g80170; Short=PG;
           AltName: Full=Pectinase At1g80170; Flags: Precursor
           gi|15028105|gb|AAK76676.1| putative polygalacturonase
           [Arabidopsis thaliana] gi|23296942|gb|AAN13206.1|
           putative polygalacturonase [Arabidopsis thaliana]
           gi|332198245|gb|AEE36366.1| putative polygalacturonase
           [Arabidopsis thaliana]
          Length = 444

 Score =  133 bits (335), Expect = 5e-29
 Identities = 70/172 (40%), Positives = 102/172 (59%), Gaps = 4/172 (2%)
 Frame = +1

Query: 178 CRAK----ILGTILSPKDTETWDRIDSSKWLAFRRVTGLIVYGYGTIDGWGTXXXXXXXX 345
           C+A+    I GTI++P D + W+ ++  KWL F  ++ L V G GT++G G         
Sbjct: 107 CKARLTLQISGTIIAPNDPDVWEGLNRRKWLYFHGLSRLTVEGGGTVNGMGQEWWERSCK 166

Query: 346 XXHSKDCTKMDPTAIKFIFCSNSYLKDLHFINSANTHIGIRQSEWFHITNLKISALKTSP 525
             HS  C +  PTA+ F  C N  +++L+ I+S   HI +       I+ LK+ A  TSP
Sbjct: 167 HNHSNPC-RGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSP 225

Query: 526 NTDGIHIDRSKHVFIDRSSIRSGDDCISIGDHTSDIRINNINCGPGHGIR*G 681
           NTDGIHI  S+ + ID +++ +GDDCISI  +++ I I+NI CGPGHGI  G
Sbjct: 226 NTDGIHISVSRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIG 277