BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029308
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   123   2e-26
ref|XP_002532473.1| protein with unknown function [Ricinus commu...   116   2e-24
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   114   6e-24
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]   114   6e-24
ref|XP_004146217.1| PREDICTED: RING-H2 finger protein ATL80-like...   114   1e-23

>ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
           gi|296082570|emb|CBI21575.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  123 bits (308), Expect = 2e-26
 Identities = 66/119 (55%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
 Frame = -2

Query: 355 NTSLAEPPESITVDSDFXXXXXXXXXXXXXXVGLIAVARCAWLRRGTRXXXXXXXXXXXN 176
           N+S AEPPE++ V+SDF              VGLIAVARCAWLRRG+             
Sbjct: 12  NSSAAEPPEAVEVESDFVVILAALLCALICVVGLIAVARCAWLRRGSAGGARASATQPAA 71

Query: 175 -KGLKKSVLRSLPRLTFNGTGNNDAKLAECAICLSEFVDGVEIRVLPQCGHGFHVGCID 2
            KGLKK +L+SLP+LT + T +   K AECAICL+EFV+G EIRVLPQCGHGFHV C+D
Sbjct: 72  NKGLKKKILQSLPKLTHDATVSG--KFAECAICLAEFVEGDEIRVLPQCGHGFHVLCVD 128


>ref|XP_002532473.1| protein with unknown function [Ricinus communis]
           gi|223527798|gb|EEF29897.1| protein with unknown
           function [Ricinus communis]
          Length = 204

 Score =  116 bits (291), Expect = 2e-24
 Identities = 65/130 (50%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 QYLLMTSGNVNTSLAEPPESITVDSDFXXXXXXXXXXXXXXVGLIAVARCAWLRRGTRXX 206
           ++  M +G  +T +A+PPES+ V+SDF              VGLIAVARCAWLR  +   
Sbjct: 3   RFTRMLTGFDSTPVADPPESVNVESDFVVILAALLCALICVVGLIAVARCAWLRH-SGSA 61

Query: 205 XXXXXXXXXNKGLKKSVLRSLPRLTFNGTGNNDAKLA--ECAICLSEFVDGVEIRVLPQC 32
                    NKGLKK +L+SLP+ T+ G+     K A  ECAICL EF  G E+RVLPQC
Sbjct: 62  SSSPSHAAANKGLKKKILQSLPKFTY-GSAAGSCKFASTECAICLGEFAQGDEVRVLPQC 120

Query: 31  GHGFHVGCID 2
           GHGFHVGCID
Sbjct: 121 GHGFHVGCID 130


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/124 (50%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
 Frame = -2

Query: 364 GNVNTSLAEPPESITVDSDFXXXXXXXXXXXXXXVGLIAVARCAWLRR---GTRXXXXXX 194
           G VN+S     ES  VDSDF              +GL+AVARCAWLRR            
Sbjct: 9   GGVNSSATASQESAAVDSDFVVILAALLCALICVLGLVAVARCAWLRRISGAANLPGGSA 68

Query: 193 XXXXXNKGLKKSVLRSLPRLTFNGTGNNDAKLAECAICLSEFVDGVEIRVLPQCGHGFHV 14
                NKGLKK +LRSLP++T+         L +CAICL+EFV G EIRVLPQCGHGFHV
Sbjct: 69  PQTPANKGLKKKILRSLPKVTY--AAETAGNLTDCAICLTEFVGGDEIRVLPQCGHGFHV 126

Query: 13  GCID 2
           GCID
Sbjct: 127 GCID 130


>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
          Length = 312

 Score =  114 bits (286), Expect = 6e-24
 Identities = 63/124 (50%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
 Frame = -2

Query: 364 GNVNTSLAEPPESITVDSDFXXXXXXXXXXXXXXVGLIAVARCAWLRR---GTRXXXXXX 194
           G VN+S     ES  VDSDF              +GL+AVARCAWLRR            
Sbjct: 9   GGVNSSATASQESAAVDSDFVVILAALLCALICVLGLVAVARCAWLRRISGAANLPGGSA 68

Query: 193 XXXXXNKGLKKSVLRSLPRLTFNGTGNNDAKLAECAICLSEFVDGVEIRVLPQCGHGFHV 14
                NKGLKK +LRSLP++T+         L +CAICL+EFV G EIRVLPQCGHGFHV
Sbjct: 69  PQTPANKGLKKKILRSLPKVTY--AAETAGNLTDCAICLTEFVGGDEIRVLPQCGHGFHV 126

Query: 13  GCID 2
           GCID
Sbjct: 127 GCID 130


>ref|XP_004146217.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
          Length = 181

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/118 (49%), Positives = 73/118 (61%)
 Frame = -2

Query: 355 NTSLAEPPESITVDSDFXXXXXXXXXXXXXXVGLIAVARCAWLRRGTRXXXXXXXXXXXN 176
           NTS A PPE++ ++SDF              VGLIAVARCAWLRRG +            
Sbjct: 11  NTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASAN-------- 62

Query: 175 KGLKKSVLRSLPRLTFNGTGNNDAKLAECAICLSEFVDGVEIRVLPQCGHGFHVGCID 2
           +GLKK +L+SLP+  +  T  +    AECAICL+EF++G EIR LPQCGH FHV C+D
Sbjct: 63  RGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120