BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029307
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]    74   8e-17
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...    69   1e-16
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    67   3e-14
gb|ABF99351.1| retrotransposon protein, putative, unclassified [...    63   1e-13
gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japoni...    63   1e-13

>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score = 74.3 bits (181), Expect(2) = 8e-17
 Identities = 33/58 (56%), Positives = 44/58 (75%)
 Frame = +2

Query: 2    DVYENCNLALFIREPQSFNEAVQDEKWKRAMDDEITTIEKNSTWKLVDLPEGKYVIGL 175
            DVYE CNL +   EPQSF EA++DE W++AM+ EI  IEKN TW+LV+ P+ K +IG+
Sbjct: 891  DVYERCNLCIV--EPQSFEEAIKDEDWRKAMEKEIDVIEKNETWQLVEKPKDKEIIGV 946



 Score = 37.4 bits (85), Expect(2) = 8e-17
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = +1

Query: 175  GVDFNETFAPVVCMETIRVVFALAAQ 252
            G DF+ETFAPV  ++TIR + A+AAQ
Sbjct: 983  GXDFHETFAPVARLDTIRTIIAVAAQ 1008


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score = 68.9 bits (167), Expect(2) = 1e-16
 Identities = 31/57 (54%), Positives = 40/57 (70%)
 Frame = +2

Query: 5   VYENCNLALFIREPQSFNEAVQDEKWKRAMDDEITTIEKNSTWKLVDLPEGKYVIGL 175
           V  +C  AL + +P  + EAV+  +WK AM +EI  IE+NSTW+LVD PEGK VIGL
Sbjct: 806 VNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNSTWELVDAPEGKNVIGL 862



 Score = 42.0 bits (97), Expect(2) = 1e-16
 Identities = 19/27 (70%), Positives = 23/27 (85%)
 Frame = +1

Query: 175 GVDFNETFAPVVCMETIRVVFALAAQM 255
           GVDF+ETF+PV   ET+RVV ALAAQ+
Sbjct: 893 GVDFDETFSPVARFETVRVVLALAAQL 919


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 67.0 bits (162), Expect(2) = 3e-14
 Identities = 31/58 (53%), Positives = 42/58 (72%)
 Frame = +2

Query: 2    DVYENCNLALFIREPQSFNEAVQDEKWKRAMDDEITTIEKNSTWKLVDLPEGKYVIGL 175
            D+YE   + LF+ +P +F EAV+ E+W  AM +EI  IEKN TW+LV+LPE K VIG+
Sbjct: 906  DIYETTQV-LFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKNVIGV 962



 Score = 36.2 bits (82), Expect(2) = 3e-14
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +1

Query: 175  GVDFNETFAPVVCMETIRVVFALAAQM 255
            GVD+++TF+PV   ET+R + ALAA M
Sbjct: 993  GVDYDDTFSPVARFETVRTLLALAAHM 1019


>gb|ABF99351.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1190

 Score = 62.8 bits (151), Expect(2) = 1e-13
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +2

Query: 41  EPQSFNEAVQDEKWKRAMDDEITTIEKNSTWKLVDLPEGKYVIGL 175
           EP SFNEA Q ++W+  M +EI TIE+N TW+LVDLP G + IGL
Sbjct: 708 EPASFNEAEQHQRWRSTMLEEIATIEENKTWRLVDLPRGHHAIGL 752



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +1

Query: 175 GVDFNETFAPVVCMETIRVVFALAAQ 252
           GVDFNE FAP+  +E++R++ ALAAQ
Sbjct: 783 GVDFNEVFAPMARLESVRMLLALAAQ 808


>gb|AAP44677.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1182

 Score = 62.8 bits (151), Expect(2) = 1e-13
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +2

Query: 41  EPQSFNEAVQDEKWKRAMDDEITTIEKNSTWKLVDLPEGKYVIGL 175
           EP SFNEA Q ++W+  M +EI TIE+N TW+LVDLP G + IGL
Sbjct: 700 EPASFNEAEQHQRWRSTMLEEIATIEENKTWRLVDLPRGHHAIGL 744



 Score = 38.1 bits (87), Expect(2) = 1e-13
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = +1

Query: 175 GVDFNETFAPVVCMETIRVVFALAAQ 252
           GVDFNE FAP+  +E++R++ ALAAQ
Sbjct: 775 GVDFNEVFAPMARLESVRMLLALAAQ 800