BLASTX nr result

ID: Coptis25_contig00029293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029293
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313218.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_003529264.1| PREDICTED: putative glutamine amidotransfera...   152   3e-35
ref|XP_003531013.1| PREDICTED: putative glutamine amidotransfera...   149   3e-34
ref|XP_004136902.1| PREDICTED: putative glutamine amidotransfera...   145   3e-33
emb|CBI38243.3| unnamed protein product [Vitis vinifera]              144   7e-33

>ref|XP_002313218.1| predicted protein [Populus trichocarpa] gi|222849626|gb|EEE87173.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  154 bits (389), Expect = 9e-36
 Identities = 73/119 (61%), Positives = 97/119 (81%), Gaps = 1/119 (0%)
 Frame = +2

Query: 2   GVRPINLS-TSKFLNSLQLPSKLSVIEFHQDEVIELPPSAEIIAWSEKTGIEMFRSGDHI 178
           G+R IN S +SK  +S+++P+ LSVIE H+DEV ELP  AE+IAWS+KTG+EMFR GDHI
Sbjct: 123 GIRTINFSASSKLSSSVKMPAVLSVIECHRDEVKELPARAEVIAWSDKTGVEMFRCGDHI 182

Query: 179 MGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSIESSDPDREAWKKLCKSFLKG 355
           MGIQGHPEY KDIL HL++R L+R+ I D++A+    +++ ++PDREAWKKLC +FLKG
Sbjct: 183 MGIQGHPEYTKDILFHLINRLLQRDFIVDSYADKIKANVDGTEPDREAWKKLCINFLKG 241


>ref|XP_003529264.1| PREDICTED: putative glutamine amidotransferase YLR126C-like
           [Glycine max]
          Length = 245

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/120 (65%), Positives = 94/120 (78%), Gaps = 2/120 (1%)
 Frame = +2

Query: 2   GVRPINLSTS-KF-LNSLQLPSKLSVIEFHQDEVIELPPSAEIIAWSEKTGIEMFRSGDH 175
           GVR I LS S +F L+SL LPS+LS+IE H+DE+ ELP  AE+IAWS+KTGIEMFR GDH
Sbjct: 124 GVRTITLSPSLRFALSSLDLPSRLSIIECHRDEIRELPAKAEVIAWSDKTGIEMFRYGDH 183

Query: 176 IMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSIESSDPDREAWKKLCKSFLKG 355
           IMGIQGHPEY+KDIL HL+DR ++RN I D   + A +     +PDREAWKKLC +FLKG
Sbjct: 184 IMGIQGHPEYSKDILLHLIDRLIQRNYIIDAFGKQARERAALWEPDREAWKKLCVTFLKG 243


>ref|XP_003531013.1| PREDICTED: putative glutamine amidotransferase YLR126C-like
           [Glycine max]
          Length = 244

 Score =  149 bits (376), Expect = 3e-34
 Identities = 77/120 (64%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
 Frame = +2

Query: 2   GVRPINLSTSK--FLNSLQLPSKLSVIEFHQDEVIELPPSAEIIAWSEKTGIEMFRSGDH 175
           GVR I LS S    L SL LPS+LS+IE H+DE+ ELP  AE+IAWS+KTGIEMFR GDH
Sbjct: 123 GVRTITLSPSLPFALISLDLPSRLSIIECHRDEIRELPAKAEVIAWSDKTGIEMFRYGDH 182

Query: 176 IMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSIESSDPDREAWKKLCKSFLKG 355
           IMGIQGHPEY+KDIL HL+DR ++RN I D   + A       +PDREAWKKLC +FLKG
Sbjct: 183 IMGIQGHPEYSKDILFHLIDRLIQRNYIIDAFGKQARDRAALWEPDREAWKKLCVTFLKG 242


>ref|XP_004136902.1| PREDICTED: putative glutamine amidotransferase YLR126C-like
           [Cucumis sativus]
          Length = 257

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/133 (54%), Positives = 98/133 (73%), Gaps = 7/133 (5%)
 Frame = +2

Query: 2   GVRPINLS--TSKFLNSLQLPSKLSVIEFHQDEVIELPPSAEIIAWSEKTGIEMFRSGDH 175
           G+R I++S  +SK L+SL++P  LS+IE H+DEV ELP  AE+I WSEKT IEMF+ GDH
Sbjct: 123 GIRAIHVSQSSSKALSSLKIPLTLSIIECHRDEVRELPLKAEVIGWSEKTRIEMFKYGDH 182

Query: 176 IMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSIESSDPDREAWKKLCKSFLKG 355
           +MGIQGHPEY  DIL HL+DR ++ N+I + +A+     +E  +P+REAWKKLC +FLKG
Sbjct: 183 MMGIQGHPEYTMDILLHLIDRLVQHNLIMETYAKELKVKVEDGEPEREAWKKLCINFLKG 242

Query: 356 -----NNINSTLL 379
                NN N+ ++
Sbjct: 243 TSHDINNNNNNII 255


>emb|CBI38243.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  144 bits (364), Expect = 7e-33
 Identities = 68/121 (56%), Positives = 93/121 (76%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   GVRPINLSTSK---FLNSLQLPSKLSVIEFHQDEVIELPPSAEIIAWSEKTGIEMFRSGD 172
           G R ++LS+S    F ++L+LP++LS+IE H+DEV ELPP AEII WSEKTGIEMF+ GD
Sbjct: 176 GFRTVHLSSSSSSNFFSTLKLPARLSIIECHRDEVRELPPKAEIIGWSEKTGIEMFKYGD 235

Query: 173 HIMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSIESSDPDREAWKKLCKSFLK 352
           H+MGIQGHPEY  DIL HL+DR L +++I ++ A+     ++  + DREAW++LC +FLK
Sbjct: 236 HMMGIQGHPEYTTDILLHLIDRLLLKDLIIESFAKEVRAKVQECEADREAWRRLCVAFLK 295

Query: 353 G 355
           G
Sbjct: 296 G 296


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