BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029290
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003606953.1| F-box protein [Medicago truncatula] gi|35550...    62   5e-08
gb|AAR15915.1| S2 self-incompatibility locus-linked putative F-b...    62   6e-08
gb|AAR15911.1| S1 self-incompatibility locus-linked putative F-b...    61   1e-07
ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|35548...    60   1e-07

>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
 Frame = +2

Query: 2   SLNNEYKVVWIY--RNPLEYTNDVEVYTLGSDKWRVITSNVPYISGIRKSCVLFKNSLHW 175
           ++  EYKV+  +  +   +   + E+YT+G+ KWR I   + +I  I         S+HW
Sbjct: 181 AITKEYKVLHTFYSKKGPDSQPEAEIYTIGTGKWRSIHKAL-HILDIFMFDSFVCGSIHW 239

Query: 176 VAYIRGKPCTTNVILSFNLAKEEFSIIQLPPQFDIGFCDELRCLVALGKHLCFINGRVPG 355
              +RG+    N I SFN   E+FS + LPP++D G          LG  + F N     
Sbjct: 240 E--LRGEDNCVNSIGSFNFENEQFSQLSLPPRYDEGGVTLTVFEGCLG--VSFFNTCCET 295

Query: 356 ALEIWVMKEYG 388
             EIWVMKEYG
Sbjct: 296 QFEIWVMKEYG 306


>ref|XP_003606953.1| F-box protein [Medicago truncatula] gi|355508008|gb|AES89150.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 17/146 (11%)
 Frame = +2

Query: 2   SLNNEYKVVWI-----YRNPLEYTNDVEVYTLGSDKWRVITSNVPYISGIRKSCVLF--- 157
           SL+ +YK++ I      +NP  Y   V +++L ++ W++I  N PY     ++  +F   
Sbjct: 168 SLSGDYKLLRISYLLDLQNPF-YDPHVRLFSLKTNSWKIIP-NFPYALYYTRTMGVFVEN 225

Query: 158 KNSLHWVAYIRGKPCTTNVILSFNLAKEEFSIIQLPPQ---------FDIGFCDELRCLV 310
            +SLHWVA  + +P  +++IL+FNL+ E F+ + LP +         F I   D      
Sbjct: 226 SSSLHWVASRKIQPFQSDLILAFNLSLETFNEVPLPDEIGEQVNSKSFKIRVAD------ 279

Query: 311 ALGKHLCFINGRVPGALEIWVMKEYG 388
            LG  LC         +++WVMKEYG
Sbjct: 280 -LGGCLCMTVDYKDTKIDVWVMKEYG 304


>gb|AAR15915.1| S2 self-incompatibility locus-linked putative F-box protein S2-A134
           [Petunia integrifolia subsp. inflata]
          Length = 379

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
 Frame = +2

Query: 11  NEYKVVW---IYRNPLEYTNDVEVYTLGSDKWR-VITSNVPYISGIRKSCVLFKNSLHWV 178
           N+YKVV    +Y+ P +    V++Y    D WR ++  +VP++     + +L+K + HW 
Sbjct: 164 NDYKVVRLSEVYKEPCDKEMKVDIYDFSVDSWRELLGQDVPFVFWFPCAEILYKRNFHWF 223

Query: 179 AYIRGKPCTTNVILSFNLAKEEFSIIQLPP--QFDIGFCDELRCLVALGKHLCFINGRVP 352
           A+         VIL F++  E+F  + +P    FD G C  L  L      +C+ + +  
Sbjct: 224 AF-----ADVVVILCFDMNTEKFHNMGMPDACHFDDGKCYGLVILFKCMTLICYPDPKPS 278

Query: 353 GALE----IWVMKEYG 388
              E    IW+MKEYG
Sbjct: 279 SPTEKLTDIWIMKEYG 294


>gb|AAR15911.1| S1 self-incompatibility locus-linked putative F-box protein S1-A113
           [Petunia integrifolia subsp. inflata]
           gi|45553269|gb|AAR15912.2| S2 self-incompatibility
           locus-linked putative F-box protein S2-A113 [Petunia
           integrifolia subsp. inflata]
          Length = 376

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
 Frame = +2

Query: 11  NEYKVVW---IYRNPLEYTNDVEVYTLGSDKWR-VITSNVPYISGIRKSCVLFKNSLHWV 178
           N+YKVV    +Y+ P +    V++Y    D WR ++   VP +  +  + +LFK + HW 
Sbjct: 164 NDYKVVRLSEVYKEPCDKEMKVDIYDFSVDSWRELLGQEVPIVYWLPCADILFKRNFHWF 223

Query: 179 AYIRGKPCTTNVILSFNLAKEEFSIIQLPP--QFDIGFCDELRCLVALGKHLCFINGRVP 352
           A+         VIL F++  E+F  + +P    FD G C  L  L      +C+ +    
Sbjct: 224 AF-----ADDVVILCFDMNTEKFHNMGMPDACHFDDGKCYGLVILCKCMSLICYPDPMPS 278

Query: 353 GALE----IWVMKEYG 388
              E    IW+MKEYG
Sbjct: 279 SPTEKLTDIWIMKEYG 294


>ref|XP_003594394.1| F-box protein [Medicago truncatula] gi|355483442|gb|AES64645.1|
           F-box protein [Medicago truncatula]
          Length = 418

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
 Frame = +2

Query: 2   SLNNEYKVVWI-----YRNPLEYTNDVEVYTLGSDKWRVITSNVPYISGIRKSCVLF--- 157
           S++ +YK++ I      +NP  Y   V +++L ++ W+VI  N+PY      +  +F   
Sbjct: 174 SVSGDYKLLRISNLLDLQNPF-YDPHVRLFSLKTNSWKVIP-NLPYSLYYALTMGVFVEN 231

Query: 158 KNSLHWVAYIRGKPCTTNVILSFNLAKEEFSIIQLPPQFDIGFCDELRC------LVALG 319
            +SLHWVA  + +    ++IL+FNL  E F+ + LP + +    +E+        + ALG
Sbjct: 232 SSSLHWVATRKVQLFQPDLILAFNLTLETFNEVPLPDEIE----EEVNSKSFKIRVAALG 287

Query: 320 KHLCFINGRVPGALEIWVMKEYG 388
             LC I       +++WVMKEYG
Sbjct: 288 GCLCMIVDYKDTKIDVWVMKEYG 310