BLASTX nr result

ID: Coptis25_contig00029279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029279
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37195.3| unnamed protein product [Vitis vinifera]               62   2e-09
ref|XP_003632392.1| PREDICTED: leucine-rich repeat receptor-like...    62   2e-09
ref|XP_002319664.1| predicted protein [Populus trichocarpa] gi|2...    58   3e-08
ref|XP_002325782.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003536949.1| PREDICTED: leucine-rich repeat receptor-like...    57   4e-07

>emb|CBI37195.3| unnamed protein product [Vitis vinifera]
          Length = 1374

 Score = 61.6 bits (148), Expect(2) = 2e-09
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -3

Query: 118 LSAKLGRLKQLNTIFLYKNNFEGDIPQEIGNCSSLVLLD 2
           + A LGRLK LNT+FLYKNNFEG+IP EIGN +SL LLD
Sbjct: 766 IPAALGRLKLLNTVFLYKNNFEGEIPPEIGNITSLQLLD 804



 Score = 24.6 bits (52), Expect(2) = 2e-09
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 173 TLESIILGYNAFE 135
           +LE+IILGYN FE
Sbjct: 727 SLETIILGYNEFE 739


>ref|XP_003632392.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
           PXL2-like [Vitis vinifera]
          Length = 1022

 Score = 61.6 bits (148), Expect(2) = 2e-09
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -3

Query: 118 LSAKLGRLKQLNTIFLYKNNFEGDIPQEIGNCSSLVLLD 2
           + A LGRLK LNT+FLYKNNFEG+IP EIGN +SL LLD
Sbjct: 263 IPAALGRLKLLNTVFLYKNNFEGEIPPEIGNITSLQLLD 301



 Score = 24.6 bits (52), Expect(2) = 2e-09
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 173 TLESIILGYNAFE 135
           +LE+IILGYN FE
Sbjct: 224 SLETIILGYNEFE 236


>ref|XP_002319664.1| predicted protein [Populus trichocarpa] gi|222858040|gb|EEE95587.1|
           predicted protein [Populus trichocarpa]
          Length = 1017

 Score = 57.8 bits (138), Expect(2) = 3e-08
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -3

Query: 118 LSAKLGRLKQLNTIFLYKNNFEGDIPQEIGNCSSLVLLD 2
           + A+LGRLKQL T++LYKNNF G IP E+GN +SLV LD
Sbjct: 259 IPAELGRLKQLATVYLYKNNFTGKIPPELGNATSLVFLD 297



 Score = 24.6 bits (52), Expect(2) = 3e-08
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -2

Query: 173 TLESIILGYNAFE 135
           +LE+IILGYN FE
Sbjct: 220 SLETIILGYNEFE 232


>ref|XP_002325782.1| predicted protein [Populus trichocarpa] gi|222862657|gb|EEF00164.1|
           predicted protein [Populus trichocarpa]
          Length = 1018

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
 Frame = -3

Query: 202 NEFRCQPPE*L*RVLF*DIMHLSFVI*SLS----AKLGRLKQLNTIFLYKNNFEGDIPQE 35
           NEF  + PE +  +   ++ +L   + SLS    A+LGRLKQL T++LYKNNF G IP E
Sbjct: 230 NEFEGEIPEEIGNLT--NLRYLDLAVGSLSGQIPAELGRLKQLTTVYLYKNNFTGQIPPE 287

Query: 34  IGNCSSLVLLD 2
           +G+ +SLV LD
Sbjct: 288 LGDATSLVFLD 298


>ref|XP_003536949.1| PREDICTED: leucine-rich repeat receptor-like protein kinase
           PXL2-like [Glycine max]
          Length = 1015

 Score = 56.6 bits (135), Expect(2) = 4e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -3

Query: 118 LSAKLGRLKQLNTIFLYKNNFEGDIPQEIGNCSSLVLLD 2
           + A+LGRLK LNT+FLYKN FEG IP  IGN +SLV LD
Sbjct: 257 IPAELGRLKLLNTVFLYKNKFEGKIPPAIGNMTSLVQLD 295



 Score = 21.9 bits (45), Expect(2) = 4e-07
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 173 TLESIILGYNAFE 135
           +LE +I+GYN FE
Sbjct: 218 SLECMIIGYNEFE 230


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