BLASTX nr result

ID: Coptis25_contig00029271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029271
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    52   2e-06

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = -1

Query: 106  EINVKWDCPPKGWLKLNMDGSSHGNPGAVGAG 11
            EI V+W CP +GW+KLN DG+S GNPG  G G
Sbjct: 1204 EILVRWQCPKEGWVKLNTDGASKGNPGPAGGG 1235



 Score = 25.4 bits (54), Expect(2) = 2e-06
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
 Frame = -3

Query: 239  TLLGTE--------LWYIWLARNEKKFTGTKQYPLSCV--IKAKKINVKQSEDDGD 102
            T++G+E         W++W  RN++ F      P+  V  I A+   +K++ D  D
Sbjct: 1137 TMMGSEWLRVFAVSCWWLWRWRNDRCFNRNPSIPIDQVSFIFARVKEIKEAMDRND 1192


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