BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029267
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_13516100.1| hypothetical protein HMPREF1043_0706 [Strepto...   102   3e-20
ref|ZP_06512771.1| conserved hypothetical protein [Mycobacterium...    85   3e-17
ref|ZP_04582125.1| LOW QUALITY PROTEIN: conserved hypothetical p...    92   3e-17
ref|ZP_06578095.1| LOW QUALITY PROTEIN: conserved hypothetical p...    80   1e-13
ref|ZP_01963575.1| hypothetical protein RUMOBE_01293 [Ruminococc...    80   1e-13

>ref|ZP_13516100.1| hypothetical protein HMPREF1043_0706 [Streptococcus anginosus
           subsp. whileyi CCUG 39159] gi|383341229|gb|EID19494.1|
           hypothetical protein HMPREF1043_0706 [Streptococcus
           anginosus subsp. whileyi CCUG 39159]
          Length = 223

 Score =  102 bits (254), Expect = 3e-20
 Identities = 54/70 (77%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   HFGENQLSRSLIGLSPLSTAHPLHFQLKWVRTSTTSYRRFILAMDRSHRFGSRTRDS-RP 178
           HFGENQLSRSLIGLSPL TAHPLHFQLKWVR+ST SY RF LAM RS RFGSRTRDS   
Sbjct: 2   HFGENQLSRSLIGLSPLPTAHPLHFQLKWVRSSTRSYTRFNLAMGRSLRFGSRTRDSIAL 61

Query: 179 YRTRFRYDSP 208
           +R  F   SP
Sbjct: 62  FRLAFATASP 71


>ref|ZP_06512771.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
           gi|289757416|ref|ZP_06516794.1| conserved hypothetical
           protein [Mycobacterium tuberculosis T85]
           gi|289693980|gb|EFD61409.1| conserved hypothetical
           protein [Mycobacterium tuberculosis EAS054]
           gi|289712980|gb|EFD76992.1| conserved hypothetical
           protein [Mycobacterium tuberculosis T85]
          Length = 69

 Score = 85.1 bits (209), Expect(2) = 3e-17
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = +3

Query: 36  LAFHPYPQLIPSIFN*SGFGPPRRLTDASSWPWIDHTASGLEHAT 170
           +AFHPYPQLIPS+FN SGFGPPR LT AS WPW+DH+ASG EHAT
Sbjct: 1   MAFHPYPQLIPSVFNLSGFGPPRGLTRASPWPWVDHSASGPEHAT 45



 Score = 28.1 bits (61), Expect(2) = 3e-17
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +1

Query: 172 TPLSDSLSLRLPHHG 216
           +P SDSLSLRLPH G
Sbjct: 55  SPYSDSLSLRLPHTG 69


>ref|ZP_04582125.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter
           bilis ATCC 43879] gi|229373011|gb|EEO23402.1| LOW
           QUALITY PROTEIN: conserved hypothetical protein
           [Helicobacter bilis ATCC 43879]
          Length = 96

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/66 (68%), Positives = 49/66 (74%)
 Frame = +3

Query: 3   ISGRTSYHGV*LAFHPYPQLIPSIFN*SGFGPPRRLTDASSWPWIDHTASGLEHATHALI 182
           IS RTSYH V LAFHPYPQLIP+ FN   F PPR +T AS+WPWIDH ASGL+H T    
Sbjct: 7   ISKRTSYHQVCLAFHPYPQLIPTRFNGYEFSPPRAITLASTWPWIDHLASGLQHLTKRPF 66

Query: 183 GLAFAT 200
            LAFAT
Sbjct: 67  RLAFAT 72


>ref|ZP_06578095.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
           ghanaensis ATCC 14672] gi|291341600|gb|EFE68556.1| LOW
           QUALITY PROTEIN: conserved hypothetical protein
           [Streptomyces ghanaensis ATCC 14672]
          Length = 172

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 38/54 (70%), Positives = 43/54 (79%), Gaps = 1/54 (1%)
 Frame = +3

Query: 54  PQLIPSIFN*SGFGPPRRLTDASSWPWIDHTASGLEHATH-ALIGLAFATTPPP 212
           PQ+IP +FN  GFGPPR LT AS+ PW+DH+ASGLE AT  AL GLAFATT PP
Sbjct: 1   PQVIPQVFNPGGFGPPRSLTSASTCPWLDHSASGLERATETALFGLAFATTSPP 54


>ref|ZP_01963575.1| hypothetical protein RUMOBE_01293 [Ruminococcus obeum ATCC 29174]
           gi|149832795|gb|EDM87878.1| hypothetical protein
           RUMOBE_01293 [Ruminococcus obeum ATCC 29174]
          Length = 199

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/68 (60%), Positives = 45/68 (66%)
 Frame = +3

Query: 3   ISGRTSYHGV*LAFHPYPQLIPSIFN*SGFGPPRRLTDASSWPWIDHTASGLEHATHALI 182
           IS RTSY  V L F PYP LIP++FN  GFGPP  LT AS+W WIDH  SGL   T AL+
Sbjct: 23  ISRRTSYLRVRLEFLPYPHLIPTLFNGCGFGPPLPLTAASTWTWIDHPVSGLPPLTLALL 82

Query: 183 GLAFATTP 206
            L F T P
Sbjct: 83  RLGFPTAP 90