BLASTX nr result

ID: Coptis25_contig00029253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029253
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529146.1| Protein PNS1, putative [Ricinus communis] gi...   205   3e-51
ref|XP_002282011.1| PREDICTED: CTL-like protein DDB_G0274487 [Vi...   200   1e-49
ref|XP_003535731.1| PREDICTED: CTL-like protein DDB_G0274487-lik...   199   2e-49
ref|XP_003637427.1| Choline transporter-like protein [Medicago t...   196   1e-48
ref|XP_002315952.1| predicted protein [Populus trichocarpa] gi|2...   195   4e-48

>ref|XP_002529146.1| Protein PNS1, putative [Ricinus communis]
           gi|223531425|gb|EEF33259.1| Protein PNS1, putative
           [Ricinus communis]
          Length = 497

 Score =  205 bits (522), Expect = 3e-51
 Identities = 105/135 (77%), Positives = 112/135 (82%)
 Frame = -3

Query: 407 VSSRLPFTMLVLQKAVKLVWSLPEVLRVAYIFMFVMLLWMVIWSFGAAGVVAMSLGDGGX 228
           V  RLPFTMLVLQKAVK+VWSLPEV+RVAY FM VMLLWM IWSFGAAGVVA S+ +GG 
Sbjct: 170 VIERLPFTMLVLQKAVKMVWSLPEVMRVAYAFMLVMLLWMAIWSFGAAGVVASSMENGGR 229

Query: 227 XXXXXXXXXXXXWTGAVFCNTVHVIVSGMVFLVLIHGGRQAASMPPKPLMKSLRHAVTTS 48
                       WTGAV CNTVHVIVSGMVFLVLIH GR+AASMPP PL+KSLR+AVTTS
Sbjct: 230 WWLLVVLSVSLFWTGAVLCNTVHVIVSGMVFLVLIHDGREAASMPPNPLLKSLRYAVTTS 289

Query: 47  FGSICYGSLFTAAIR 3
           FGSICYGSLFTAAIR
Sbjct: 290 FGSICYGSLFTAAIR 304


>ref|XP_002282011.1| PREDICTED: CTL-like protein DDB_G0274487 [Vitis vinifera]
           gi|297737849|emb|CBI27050.3| unnamed protein product
           [Vitis vinifera]
          Length = 504

 Score =  200 bits (508), Expect = 1e-49
 Identities = 102/135 (75%), Positives = 110/135 (81%)
 Frame = -3

Query: 407 VSSRLPFTMLVLQKAVKLVWSLPEVLRVAYIFMFVMLLWMVIWSFGAAGVVAMSLGDGGX 228
           V  RLPF+MLVLQKAVKLVW+LPEV+RVAY FM VMLLWM IWSFGA+GVVA S+GD G 
Sbjct: 177 VMDRLPFSMLVLQKAVKLVWNLPEVMRVAYAFMLVMLLWMAIWSFGASGVVASSIGDSGR 236

Query: 227 XXXXXXXXXXXXWTGAVFCNTVHVIVSGMVFLVLIHGGRQAASMPPKPLMKSLRHAVTTS 48
                       WTGAV CNTVHVIVSG+VFLVLIHGG +AA MPP  LMKSLR+AVTTS
Sbjct: 237 WWLLVVFSVSLFWTGAVLCNTVHVIVSGIVFLVLIHGGPEAAPMPPNSLMKSLRYAVTTS 296

Query: 47  FGSICYGSLFTAAIR 3
           FGSICYGSLFTAAIR
Sbjct: 297 FGSICYGSLFTAAIR 311


>ref|XP_003535731.1| PREDICTED: CTL-like protein DDB_G0274487-like [Glycine max]
          Length = 440

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/135 (73%), Positives = 111/135 (82%)
 Frame = -3

Query: 407 VSSRLPFTMLVLQKAVKLVWSLPEVLRVAYIFMFVMLLWMVIWSFGAAGVVAMSLGDGGX 228
           V  RLPFTMLVLQKAVK+VW++PEV+RVAY FMFV+LLWM +WSFGAAGVVA S+GDGG 
Sbjct: 113 VIDRLPFTMLVLQKAVKMVWNIPEVMRVAYAFMFVVLLWMALWSFGAAGVVASSMGDGGR 172

Query: 227 XXXXXXXXXXXXWTGAVFCNTVHVIVSGMVFLVLIHGGRQAASMPPKPLMKSLRHAVTTS 48
                       WTGAV CNTVHV+VSGMVFLVL HGGR AAS+P   LMKSL++A+TTS
Sbjct: 173 WWLLVVLSVSLFWTGAVLCNTVHVVVSGMVFLVLFHGGRDAASIPANSLMKSLQYALTTS 232

Query: 47  FGSICYGSLFTAAIR 3
           FGSICYGSLFTAAIR
Sbjct: 233 FGSICYGSLFTAAIR 247


>ref|XP_003637427.1| Choline transporter-like protein [Medicago truncatula]
           gi|355503362|gb|AES84565.1| Choline transporter-like
           protein [Medicago truncatula]
          Length = 371

 Score =  196 bits (499), Expect = 1e-48
 Identities = 98/135 (72%), Positives = 111/135 (82%)
 Frame = -3

Query: 407 VSSRLPFTMLVLQKAVKLVWSLPEVLRVAYIFMFVMLLWMVIWSFGAAGVVAMSLGDGGX 228
           V  RLPFTMLVLQKAVK+VW+LPEV+RV+Y FMF +LLWM +WSFGAAGVVA +L DGG 
Sbjct: 171 VIDRLPFTMLVLQKAVKMVWNLPEVMRVSYAFMFAVLLWMALWSFGAAGVVASNLSDGGR 230

Query: 227 XXXXXXXXXXXXWTGAVFCNTVHVIVSGMVFLVLIHGGRQAASMPPKPLMKSLRHAVTTS 48
                       WTGAV CNTVHVIVSGMVFLVL+HGGR+AAS+P   LMKSL++A+TTS
Sbjct: 231 WWLLVVFSVSLFWTGAVLCNTVHVIVSGMVFLVLLHGGREAASIPANSLMKSLQYALTTS 290

Query: 47  FGSICYGSLFTAAIR 3
           FGSICYGSLFTAAIR
Sbjct: 291 FGSICYGSLFTAAIR 305


>ref|XP_002315952.1| predicted protein [Populus trichocarpa] gi|222864992|gb|EEF02123.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score =  195 bits (495), Expect = 4e-48
 Identities = 100/135 (74%), Positives = 109/135 (80%)
 Frame = -3

Query: 407 VSSRLPFTMLVLQKAVKLVWSLPEVLRVAYIFMFVMLLWMVIWSFGAAGVVAMSLGDGGX 228
           V  RLPFTMLVLQKAVK+VWSLPEV+RV+Y FM VMLLWM +WSFGAAGVVA ++   G 
Sbjct: 155 VIDRLPFTMLVLQKAVKMVWSLPEVMRVSYAFMLVMLLWMGLWSFGAAGVVASNINLNGR 214

Query: 227 XXXXXXXXXXXXWTGAVFCNTVHVIVSGMVFLVLIHGGRQAASMPPKPLMKSLRHAVTTS 48
                       WTGAV CNTVHVIVSGMVFLVLIHGGR+AASMPP  LMKSLR++VT S
Sbjct: 215 WWLLVVLSLSLFWTGAVLCNTVHVIVSGMVFLVLIHGGREAASMPPNSLMKSLRYSVTKS 274

Query: 47  FGSICYGSLFTAAIR 3
           FGSICYGSLFTAAIR
Sbjct: 275 FGSICYGSLFTAAIR 289


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