BLASTX nr result

ID: Coptis25_contig00029241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029241
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527466.1| Indole-3-acetic acid-amido synthetase GH3.3,...   174   5e-42
ref|XP_002283886.1| PREDICTED: probable indole-3-acetic acid-ami...   174   9e-42
emb|CAN70815.1| hypothetical protein VITISV_042944 [Vitis vinifera]   174   9e-42
gb|ADK27716.1| GH3 [Dimocarpus longan]                                173   1e-41
pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid...   172   3e-41

>ref|XP_002527466.1| Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus
           communis] gi|223533106|gb|EEF34864.1| Indole-3-acetic
           acid-amido synthetase GH3.3, putative [Ricinus communis]
          Length = 597

 Score =  174 bits (442), Expect = 5e-42
 Identities = 82/103 (79%), Positives = 88/103 (85%)
 Frame = +1

Query: 1   ITKIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLEPMAKPSDV 180
           IT+IWPNTKYLDVIVTGAM+QYIPTL+YYSGGLPLACTMYASSECYFGLNL PM KPS+V
Sbjct: 297 ITRIWPNTKYLDVIVTGAMSQYIPTLDYYSGGLPLACTMYASSECYFGLNLNPMCKPSEV 356

Query: 181 SYTIMPNMAYFEFLPHEPXXXXXXXXXXXRLVDLVDVEIDKEY 309
           SYTIMPNMAYFEFLPHEP           +LVDLVDV + KEY
Sbjct: 357 SYTIMPNMAYFEFLPHEPSCSGLTRDSPPKLVDLVDVVVGKEY 399


>ref|XP_002283886.1| PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1
           [Vitis vinifera]
          Length = 600

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/103 (77%), Positives = 89/103 (86%)
 Frame = +1

Query: 1   ITKIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLEPMAKPSDV 180
           IT+IWPNTKYLDVIVTGAMAQYIPTL+Y+SGG+PLACTMYASSECYFGLNL+PM+KPS+V
Sbjct: 297 ITRIWPNTKYLDVIVTGAMAQYIPTLDYFSGGIPLACTMYASSECYFGLNLKPMSKPSEV 356

Query: 181 SYTIMPNMAYFEFLPHEPXXXXXXXXXXXRLVDLVDVEIDKEY 309
           SYTIMPNM YFEFLPH+P           RLVDL DVE+ KEY
Sbjct: 357 SYTIMPNMGYFEFLPHDPSAPPLSRDSPPRLVDLADVEVGKEY 399


>emb|CAN70815.1| hypothetical protein VITISV_042944 [Vitis vinifera]
          Length = 607

 Score =  174 bits (440), Expect = 9e-42
 Identities = 80/103 (77%), Positives = 89/103 (86%)
 Frame = +1

Query: 1   ITKIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLEPMAKPSDV 180
           IT+IWPNTKYLDVIVTGAMAQYIPTL+Y+SGG+PLACTMYASSECYFGLNL+PM+KPS+V
Sbjct: 297 ITRIWPNTKYLDVIVTGAMAQYIPTLDYFSGGIPLACTMYASSECYFGLNLKPMSKPSEV 356

Query: 181 SYTIMPNMAYFEFLPHEPXXXXXXXXXXXRLVDLVDVEIDKEY 309
           SYTIMPNM YFEFLPH+P           RLVDL DVE+ KEY
Sbjct: 357 SYTIMPNMGYFEFLPHDPSAPPLSRDSPPRLVDLADVEVGKEY 399


>gb|ADK27716.1| GH3 [Dimocarpus longan]
          Length = 596

 Score =  173 bits (438), Expect = 1e-41
 Identities = 83/103 (80%), Positives = 89/103 (86%)
 Frame = +1

Query: 1   ITKIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLEPMAKPSDV 180
           IT++WPNTKYLDVIVTGAMAQYIPTL++YSGGLPLACTMYASSECYFGLNL PM KPS+V
Sbjct: 297 ITRVWPNTKYLDVIVTGAMAQYIPTLDHYSGGLPLACTMYASSECYFGLNLNPMCKPSEV 356

Query: 181 SYTIMPNMAYFEFLPHEPXXXXXXXXXXXRLVDLVDVEIDKEY 309
           SYTIMPNMAYFEFLPHEP           RLVDLVDVE+ KEY
Sbjct: 357 SYTIMPNMAYFEFLPHEP--GSTATGSAPRLVDLVDVEVGKEY 397


>pdb|4B2G|A Chain A, Crystal Structure Of An Indole-3-acetic Acid Amido
           Synthase From Vitis Vinifera Involved In Auxin
           Homeostasis gi|430800812|pdb|4B2G|B Chain B, Crystal
           Structure Of An Indole-3-acetic Acid Amido Synthase From
           Vitis Vinifera Involved In Auxin Homeostasis
          Length = 609

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/103 (79%), Positives = 87/103 (84%)
 Frame = +1

Query: 1   ITKIWPNTKYLDVIVTGAMAQYIPTLNYYSGGLPLACTMYASSECYFGLNLEPMAKPSDV 180
           IT+IWPNTKYLDVIVTGAMAQYIPTL+YYSGGLPLACTMYASSECYFGLNL PM+KPS+V
Sbjct: 297 ITRIWPNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTMYASSECYFGLNLNPMSKPSEV 356

Query: 181 SYTIMPNMAYFEFLPHEPXXXXXXXXXXXRLVDLVDVEIDKEY 309
           SYTIMPNMAYFEFLPHE            RLVDL  VE+ KEY
Sbjct: 357 SYTIMPNMAYFEFLPHEHSSIPLSRDSPPRLVDLAHVEVGKEY 399


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