BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029213
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    94   5e-17
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               91   5e-16
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    84   5e-14
ref|NP_173137.1| F-box/RNI-like/FBD-like domains-containing prot...    80   7e-13

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 14/286 (4%)
 Frame = +2

Query: 8    MSSLKVLHLDFITFSCEEEIQVSLSFPVLEKLVLIDCIW-NIEVVNIYAPALENLMINDA 184
            +S LK+L+L  + F+ +   Q   S P L +L + +C W N+  V+I AP L++L I++ 
Sbjct: 170  LSCLKILNLYEVIFTDDHSTQQLFSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEP 229

Query: 185  SYAAD-NIYDFEIKIYAESLITLDLVSKFAYKFSLHNLSSLSKASVDFHSEHGIED---R 352
              ++  ++    ++I+   L    ++   +  + L+  S +      F +         R
Sbjct: 230  CQSSPASLGGCHVRIFGTHLADFTIIGTLSNDYCLYESSVVETCISIFSAADKPRQTAYR 289

Query: 353  VSKLIEGIGNVKDLMLSSEAVEILFVANLTVELLAFP----NLKSLRVHIQGGYVYGEIL 520
             SKL+EGI + + L L++  V++L  A    ELLAFP    NL SL    +   ++ +  
Sbjct: 290  ASKLLEGISSAQSLCLTTNVVDVLDDAP---ELLAFPLEFRNLTSLLFESEESNLHSDGF 346

Query: 521  TELFSYLPNVESLLFTKEVDIIFFEGNGC---WTLKAIPQSFLSNLKSVELRSFDGNEND 691
              +    P++ +L F   V +     N C   WTL   P  FLS LK +++  F G+E +
Sbjct: 347  WHIIYNSPHLIALQFYG-VSMPKVPSN-CREDWTLDPSPPCFLSCLKFIQVGRFGGDEKE 404

Query: 692  LGLVEFLLKNAIALQKVTI--RGSSALSANPKKQFEVTKQLLMLPR 823
            L  V FLLKNA AL+ + I   GS+       K  E+ +QLL LPR
Sbjct: 405  LDAVGFLLKNATALESMDIIYSGSARRDQGVDKTNEIHQQLLALPR 450


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 89/298 (29%), Positives = 141/298 (47%), Gaps = 18/298 (6%)
 Frame = +2

Query: 5    CMSSLKVLHLDFITFSCEEEIQVSLS-FPVLEKLVLIDCIWNIEVVNIYAPALENLMIND 181
            C  SLK+L    +TF+ E+  Q   S  PVL+ L    C W    +++  P L+ L I  
Sbjct: 169  CFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNINISVAIPTLKKLDIFF 228

Query: 182  ASYAADNIYDFEIKIYAESLITLDLVSKFAYKFSLHNLSSLSKASVDF------HSEHGI 343
             S + D       KI A +L++L   S       L N +S+  A++D       ++E  +
Sbjct: 229  RSSSLDR-NSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQNNELHV 287

Query: 344  EDRVSKLIEGIGNVKDLMLSSEAVEILFVANLTVELL-AFPNLKSLRVHIQGGYVYGEIL 520
                 +L   +G+V+ L LS + ++ L  A   + LL +F NL  L VH        E+L
Sbjct: 288  AVFAIELFSRLGSVESLRLSDQTIQCLNYAKSALHLLPSFKNLTRLEVHFDDPSC--EVL 345

Query: 521  TELFSYLPNVESLLFTKEVDII----FFEGNGC------WTLKAIPQSFLSNLKSVELRS 670
             ++    P +E  L    V ++    F  G+        WT  ++P  F S+LKS ++  
Sbjct: 346  ADILRKSPKLE-FLHIYGVHLVSCSRFSSGSYLSLDSEDWTSDSLPCCFKSSLKSCDISD 404

Query: 671  FDGNENDLGLVEFLLKNAIALQKVTIRGSSALSANPKKQFEVTKQLLMLPRDSTCVID 844
            F G+E ++ LV+FLL+N   L+++ I  +  LS   KK  +V  QL  L   S CVI+
Sbjct: 405  FRGDEAEIRLVKFLLENVTLLREMNIYCTGYLSKKSKKLADVRNQLQALGMGS-CVIN 461


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 82/246 (33%), Positives = 123/246 (50%), Gaps = 12/246 (4%)
 Frame = +2

Query: 47  FSCEEEIQVSLSFPVLEKLVLIDCIWNIE---VVNIYAPALENLMINDASYAADNIYDFE 217
           F C+  + + L  PVLE+LV+    W ++   V N+ AP L++L I  + Y        +
Sbjct: 139 FFCKTLVVLKLC-PVLEELVIER--WRLDEQWVFNVSAPTLKSLAIYFSKY--------K 187

Query: 218 IKIYAESLITLDLVSKFAYKFSLHNLSSLSKASVDFHSE-HGIED------RVSKLIEGI 376
           + + A +L  L +    +  + + NLSSL KA V+      GI+D      R+ +L+ GI
Sbjct: 188 LVVDAPNLEYLSITDFVSEDYLMSNLSSLVKAYVNVGPTIRGIDDQILYRGRIYELLRGI 247

Query: 377 GNVKDLMLSSEAVEILFVANLTVELLAFPNLKSLRVHIQGGYVYGEILTELFSYLPNVES 556
            NVK L LS E +  L       EL AF ++  L + +  GY   E L E     PN+E 
Sbjct: 248 SNVKHLSLSGETLHSLSGMFCGYELPAFHSVTRLELEVDYGYGL-EFLKEFLDTSPNLEI 306

Query: 557 LLFTK-EVDIIFFEGNGCWTLKA-IPQSFLSNLKSVELRSFDGNENDLGLVEFLLKNAIA 730
           L+      D    E    WTL   +P     +L  VE++ FDG + +LG +EFLLKNA  
Sbjct: 307 LILENVNKDECEIEE---WTLPLQVPTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARV 363

Query: 731 LQKVTI 748
           L+K++I
Sbjct: 364 LKKMSI 369


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 24/298 (8%)
 Frame = +2

Query: 8    MSSLKVLHLDFITFSCEEEIQVSLS-FPVLEKLVLI----DCIWNIEVVNIYAPALENLM 172
            + SLK LHL  + +S ++ IQ  LS  PVLE+LV+     D  W   VVN+  P+L+ L 
Sbjct: 162  LPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQW---VVNVSNPSLKILR 218

Query: 173  INDASYAADNIY-----DFEIKIYAESLITLDLVSKFAYKFSLHNLSSLSKASVDFHSEH 337
            I   +    + Y     D+++ + A +L  L +    +  + + +L SL KA +D   + 
Sbjct: 219  IFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDS 278

Query: 338  ------------GIEDRVSKLIEGIGNVKDLMLSSEAVEILFVANLTVELLAFPNLKSLR 481
                             + +L+  I NVK L L+   ++ L       +L  F N+  L 
Sbjct: 279  EEFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLE 338

Query: 482  VHIQGGYVYGEILTELFSYLPNVESLLF-TKEVDIIFFEGNGCWTLKA-IPQSFLSNLKS 655
                GG+ + + L       PN+E+L+  T   + +  EG   W +   +P   + +LK 
Sbjct: 339  FLFIGGFNW-DFLPNFLHSSPNLEALVIETGYTNELIPEG---WLMPLQVPACLVLHLKE 394

Query: 656  VELRSFDGNENDLGLVEFLLKNAIALQKVTIRGSSALSANPKKQFEVTKQLLMLPRDS 829
            +E+R   G + +L  VE+LLKNA  LQ++TI       +   ++F V K+LL LPR S
Sbjct: 395  IEIRRIVGEDYELEAVEYLLKNAEVLQQMTI---DCHESYMDQEFCVCKKLLGLPRGS 449


>ref|NP_173137.1| F-box/RNI-like/FBD-like domains-containing protein [Arabidopsis
            thaliana] gi|75263252|sp|Q9FZ52.1|FDL3_ARATH RecName:
            Full=F-box/FBD/LRR-repeat protein At1g16930
            gi|9802769|gb|AAF99838.1|AC051629_5 Hypothetical protein
            [Arabidopsis thaliana] gi|332191402|gb|AEE29523.1|
            F-box/RNI-like/FBD-like domains-containing protein
            [Arabidopsis thaliana]
          Length = 449

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 72/297 (24%), Positives = 138/297 (46%), Gaps = 25/297 (8%)
 Frame = +2

Query: 17   LKVLHLDFITFSCEEEIQVSLS-FPVLEKLVLI-DCIWNIEVVNIYAPALENLMINDASY 190
            +K++HLD + +  +  +++ +S  PVLE+L ++ D   ++EVV + + +L++  I+   Y
Sbjct: 164  VKIMHLDMVKYDADSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKIDSERY 223

Query: 191  AADNIYDFEIKIYAESLITLDLVSKFAYKFSLHNLSSLSKASVD--FHSEHG--IED--- 349
             + N     + I A  L  ++L    +  F +HN+   +K  +D  F+ E+   +E    
Sbjct: 224  ESQN---HVVTIDAPRLEYMNLCDHRSDSFIIHNIGPFAKVDIDVIFNVEYNDPLEPDDS 280

Query: 350  ----RVSKLIEGIGNVKDLMLSSEAVEILFVANLTVELLAFPNLKSLRVHIQGGYVYGEI 517
                 + K + G+  V ++++SS+ ++++       +L  F NL  L  + +    + E+
Sbjct: 281  SKIAMLGKFLTGLSTVSEMVISSDTLQVIHDYCKMEQLPQFSNLSRLHAYFED--TWWEM 338

Query: 518  LTELFSYLPNVESLLFTKEVDIIFFEGNGCWTLKAIPQSFLSNLKSVEL----------- 664
            L       PN+ SL+   E D   F       L  +PQ FLS+L+ V L           
Sbjct: 339  LPTFLESFPNLHSLVM--EFDC--FPDTEQIDLSYVPQCFLSSLEFVHLKTPYVVNMQKE 394

Query: 665  -RSFDGNENDLGLVEFLLKNAIALQKVTIRGSSALSANPKKQFEVTKQLLMLPRDST 832
             R   G  +   L ++ L+N  AL+K+T+  S            +  ++  +PR ST
Sbjct: 395  GRPLTGTSSKRKLAKYFLENGAALKKLTVSASFC---------NIIDEIKAIPRSST 442