BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029201
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80322.1| hypothetical protein VITISV_021000 [Vitis vinifera]    76   2e-12
emb|CAN60781.1| hypothetical protein VITISV_022451 [Vitis vinifera]    76   3e-12
emb|CAN63771.1| hypothetical protein VITISV_010879 [Vitis vinifera]    75   4e-12
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    75   5e-12
emb|CAN68860.1| hypothetical protein VITISV_023024 [Vitis vinifera]    75   7e-12

>emb|CAN80322.1| hypothetical protein VITISV_021000 [Vitis vinifera]
          Length = 340

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/84 (42%), Positives = 55/84 (65%)
 Frame = +2

Query: 86  RTVLIKSISSAIPSFHMSTFMLPTHTTSIINGLQRDFWWGTSKGKAHPLYLKSWKFICQS 265
           R  L+KS  S++P++ +S F++P    + +  +QRDF WG    +  P +L SWK IC +
Sbjct: 141 RLTLLKSTLSSLPTYFLSLFVIPKKVCTRLEKIQRDFLWGGGALENKP-HLVSWKVICAA 199

Query: 266 KKSGGIGIRNMAINNQAHLSRIIW 337
           KK GG+GIRN+AI N+A L + +W
Sbjct: 200 KKDGGLGIRNLAIFNKALLGKWLW 223


>emb|CAN60781.1| hypothetical protein VITISV_022451 [Vitis vinifera]
          Length = 562

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/94 (41%), Positives = 56/94 (59%)
 Frame = +2

Query: 56  LEE*ITFTTTRTVLIKSISSAIPSFHMSTFMLPTHTTSIINGLQRDFWWGTSKGKAHPLY 235
           L E I     R  L+KS  S++P++ +S F++P    + +  +QRDF WG       P +
Sbjct: 175 LMEAIPLQRCRLTLLKSTLSSLPTYFISLFVIPKRVCAKLEKIQRDFLWGGGALGNKP-H 233

Query: 236 LKSWKFICQSKKSGGIGIRNMAINNQAHLSRIIW 337
           L SWK IC +KK GG+GIRN+AI N A L + +W
Sbjct: 234 LVSWKVICTAKKDGGLGIRNLAIFNNALLGKWLW 267


>emb|CAN63771.1| hypothetical protein VITISV_010879 [Vitis vinifera]
          Length = 957

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 35/84 (41%), Positives = 55/84 (65%)
 Frame = +2

Query: 86  RTVLIKSISSAIPSFHMSTFMLPTHTTSIINGLQRDFWWGTSKGKAHPLYLKSWKFICQS 265
           R  L+K+  S++P++ +S F++P    + +  +QRDF WG    +  P +L SWK IC +
Sbjct: 16  RLTLLKNTLSSLPTYFLSQFVIPKRVCTRLEKIQRDFLWGGGALENKP-HLVSWKVICAA 74

Query: 266 KKSGGIGIRNMAINNQAHLSRIIW 337
           KK GG+GIRN+AI N+A L + +W
Sbjct: 75  KKDGGLGIRNLAIFNKALLGKWLW 98


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/84 (41%), Positives = 52/84 (61%)
 Frame = +2

Query: 86   RTVLIKSISSAIPSFHMSTFMLPTHTTSIINGLQRDFWWGTSKGKAHPLYLKSWKFICQS 265
            + VLIK+++ AIP++ MS F LP  T+  IN     FWWG   GK   ++ + W  +C S
Sbjct: 1077 KEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGKEGGKG--IHWRRWSDLCFS 1134

Query: 266  KKSGGIGIRNMAINNQAHLSRIIW 337
            KK GG+G R++++ NQA L +  W
Sbjct: 1135 KKDGGLGFRDLSLFNQALLGKQGW 1158


>emb|CAN68860.1| hypothetical protein VITISV_023024 [Vitis vinifera]
          Length = 1795

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/84 (41%), Positives = 54/84 (64%)
 Frame = +2

Query: 86   RTVLIKSISSAIPSFHMSTFMLPTHTTSIINGLQRDFWWGTSKGKAHPLYLKSWKFICQS 265
            R  L+KS  S++P++ +S F++P    + +  +QRDF WG    +  P +L  WK IC +
Sbjct: 1376 RLTLLKSTLSSLPTYFLSLFVIPKRVCARLEKIQRDFLWGGGALENKP-HLVCWKVICAA 1434

Query: 266  KKSGGIGIRNMAINNQAHLSRIIW 337
            KK GG+GIRN+AI N+A L + +W
Sbjct: 1435 KKDGGLGIRNLAIFNKALLGKWLW 1458