BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029199
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         98   9e-23
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...    96   3e-22
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...    94   1e-21
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...    93   2e-21
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...    92   2e-21

>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 97.8 bits (242), Expect(2) = 9e-23
 Identities = 48/126 (38%), Positives = 65/126 (51%)
 Frame = -1

Query: 421  WAKKVVSRYDQDQMVQQLITQLLLVPNDVQHYSYKSGIVRYKNRIYIGCNNDLRQKLLAT 242
            W  ++++ Y  D     L +QL + P     Y+  SGI+RYKNR+Y+G   DLR KL  +
Sbjct: 838  WITEILASYATDPKCTALESQLRITPQGHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQS 897

Query: 241  XXXXXXXXXXXXXXSYQKAKSYFYWPGMKKDIIEFVSSCDICQRNKGEHXXXXXXXXXXX 62
                          +YQ+AK  FYWPGMKKDI  +V  C +CQ+NK EH           
Sbjct: 898  FHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLP 957

Query: 61   XPDHAW 44
             P+ AW
Sbjct: 958  IPEMAW 963



 Score = 33.9 bits (76), Expect(2) = 9e-23
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3

Query: 65   PCS*PCLAWQHITMDFIEGLP 3
            P   P +AW HI+MDFIEGLP
Sbjct: 955  PLPIPEMAWTHISMDFIEGLP 975


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score = 95.9 bits (237), Expect(2) = 3e-22
 Identities = 47/126 (37%), Positives = 64/126 (50%)
 Frame = -1

Query: 421 WAKKVVSRYDQDQMVQQLITQLLLVPNDVQHYSYKSGIVRYKNRIYIGCNNDLRQKLLAT 242
           W  ++++ Y  D     L +QL + P     Y+   GI+RYKNR+Y+G   DLR KL  +
Sbjct: 251 WIIEILASYATDPKCTALESQLRITPQGHPSYTLTGGILRYKNRLYVGAGTDLRAKLQQS 310

Query: 241 XXXXXXXXXXXXXXSYQKAKSYFYWPGMKKDIIEFVSSCDICQRNKGEHXXXXXXXXXXX 62
                         +YQ+AK  FYWPGMKKDI  +V  C +CQ+NK EH           
Sbjct: 311 FHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQPGLLHPLP 370

Query: 61  XPDHAW 44
            P+ AW
Sbjct: 371 VPEMAW 376



 Score = 33.9 bits (76), Expect(2) = 3e-22
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3

Query: 65  PCS*PCLAWQHITMDFIEGLP 3
           P   P +AW HI+MDFIEGLP
Sbjct: 368 PLPVPEMAWTHISMDFIEGLP 388


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score = 94.4 bits (233), Expect(2) = 1e-21
 Identities = 46/126 (36%), Positives = 70/126 (55%)
 Frame = -1

Query: 421 WAKKVVSRYDQDQMVQQLITQLLLVPNDVQHYSYKSGIVRYKNRIYIGCNNDLRQKLLAT 242
           W  +V++ Y+ D+  + LITQ+ + P    +YS K+GI+RYK R+YIG N  L+++LL T
Sbjct: 248 WILEVLASYEGDEKCRDLITQISISPTAQPNYSLKNGILRYKGRLYIGSNTGLKRQLLVT 307

Query: 241 XXXXXXXXXXXXXXSYQKAKSYFYWPGMKKDIIEFVSSCDICQRNKGEHXXXXXXXXXXX 62
                         +YQ+ K  F+WP MK+++ EFV   D+CQ+N  EH           
Sbjct: 308 FHDSALGGHSGGRVTYQRLKLIFHWPRMKQEVEEFVKLYDVCQKNNCEHVPYPGLLQPIP 367

Query: 61  XPDHAW 44
            P+ AW
Sbjct: 368 IPEMAW 373



 Score = 33.9 bits (76), Expect(2) = 1e-21
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3

Query: 65  PCS*PCLAWQHITMDFIEGLP 3
           P   P +AW HI+MDFIEGLP
Sbjct: 365 PIPIPEMAWTHISMDFIEGLP 385


>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score = 92.8 bits (229), Expect(2) = 2e-21
 Identities = 45/126 (35%), Positives = 65/126 (51%)
 Frame = -1

Query: 421  WAKKVVSRYDQDQMVQQLITQLLLVPNDVQHYSYKSGIVRYKNRIYIGCNNDLRQKLLAT 242
            W + V + Y  D   ++L+ QL L PN    Y+  +G++RYK RIY+G + +LR  ++ +
Sbjct: 863  WIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHS 922

Query: 241  XXXXXXXXXXXXXXSYQKAKSYFYWPGMKKDIIEFVSSCDICQRNKGEHXXXXXXXXXXX 62
                          +YQ+ K  FYWPGMKK+I   V  C +CQR+K EH           
Sbjct: 923  LHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHYPGLLEPLP 982

Query: 61   XPDHAW 44
             PD AW
Sbjct: 983  IPDMAW 988



 Score = 34.3 bits (77), Expect(2) = 2e-21
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3

Query: 65   PCS*PCLAWQHITMDFIEGLP 3
            P   P +AW HI+MDFIEGLP
Sbjct: 980  PLPIPDMAWTHISMDFIEGLP 1000


>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
           gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
           Japonica Group]
          Length = 866

 Score = 91.7 bits (226), Expect(2) = 2e-21
 Identities = 44/127 (34%), Positives = 64/127 (50%)
 Frame = -1

Query: 424 QWAKKVVSRYDQDQMVQQLITQLLLVPNDVQHYSYKSGIVRYKNRIYIGCNNDLRQKLLA 245
           QW  +V + Y  D    +L + L + P     Y+ K GI+RYK+ I +G  N LR++LL 
Sbjct: 392 QWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGGILRYKDHIVVGAGNTLREQLLV 451

Query: 244 TXXXXXXXXXXXXXXSYQKAKSYFYWPGMKKDIIEFVSSCDICQRNKGEHXXXXXXXXXX 65
           +              +YQ+ K  FYWPGMK  + +FV +C +CQ+NK EH          
Sbjct: 452 SFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVKACPVCQKNKTEHNMPAGLLQPL 511

Query: 64  XXPDHAW 44
             P+ AW
Sbjct: 512 PLPEMAW 518



 Score = 35.4 bits (80), Expect(2) = 2e-21
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -3

Query: 65  PCS*PCLAWQHITMDFIEGLP 3
           P   P +AW HITMDF+EGLP
Sbjct: 510 PLPLPEMAWSHITMDFVEGLP 530