BLASTX nr result

ID: Coptis25_contig00029197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029197
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258...    63   2e-08
gb|AFK34149.1| unknown [Lotus japonicus]                               55   6e-06

>ref|XP_002279758.1| PREDICTED: uncharacterized protein LOC100258543 [Vitis vinifera]
           gi|296083837|emb|CBI24225.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = -1

Query: 306 GGRKPLQDISNASSNRQKGTTTKKKGLNVAKEEFNIADERFLHDPKKRIAAQKAEIEQNL 127
           G RK L +I+N S+   + T+ KKK L   KEEFNIA+ERFLHD KK I AQKA  E   
Sbjct: 44  GNRKALDNITNKSTLHHE-TSLKKKHL--PKEEFNIAEERFLHDHKKCIEAQKAATEPCF 100

Query: 126 RDTVLFEHG--LLQSDTSPKSEKPKAASTSSVQRYLD 22
            D VL  HG  +  SD+   +E P+A      + YLD
Sbjct: 101 LDIVLPGHGNHINLSDSISHAEYPQA---KQAKIYLD 134


>gb|AFK34149.1| unknown [Lotus japonicus]
          Length = 184

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/64 (53%), Positives = 42/64 (65%)
 Frame = -1

Query: 303 GRKPLQDISNASSNRQKGTTTKKKGLNVAKEEFNIADERFLHDPKKRIAAQKAEIEQNLR 124
           GRK L DISN +S RQ  T+ +KK  N+ KE+ NI +E FLHD KK I AQKA +     
Sbjct: 46  GRKALNDISNKTS-RQTETSVQKK--NLPKEDVNIKEEMFLHDHKKCIEAQKAAMNNFNL 102

Query: 123 DTVL 112
           +TVL
Sbjct: 103 ETVL 106


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