BLASTX nr result

ID: Coptis25_contig00029191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029191
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610121.1| hypothetical protein MTR_4g128160 [Medicago ...    58   9e-07
ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777...    55   8e-06

>ref|XP_003610121.1| hypothetical protein MTR_4g128160 [Medicago truncatula]
           gi|355511176|gb|AES92318.1| hypothetical protein
           MTR_4g128160 [Medicago truncatula]
          Length = 270

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   PTEMELKDIRNRQSRRMPSP-LFPAFDGEETVSVKRVGGKGTWRLLRVLSCKGEANGVIT 179
           P EMEL DI+NRQ RR PS  +FPA +    +++ R  GK +W++L+ LSCK   +  +T
Sbjct: 201 PPEMELNDIKNRQVRRNPSKSMFPASETSGNLNLNRSSGKVSWKILKALSCKDHNSVAVT 260

Query: 180 ASLS 191
            + S
Sbjct: 261 TTFS 264


>ref|XP_003555741.1| PREDICTED: uncharacterized protein LOC100777782 [Glycine max]
          Length = 254

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
 Frame = +3

Query: 3   PTEMELKDIRNRQSRRMPSP-LFPAFDGEETVSVKRVGGKGTWRLLRVLSCKGEANGVIT 179
           P EMEL D++NRQ RR PS  +F   D    ++V R  GK +WR+L+ LSCK  ++  +T
Sbjct: 186 PPEMELSDMKNRQVRRNPSSTMFLTADSGGKMAVNRSHGKVSWRILKALSCKDHSSVAVT 245

Query: 180 AS 185
            S
Sbjct: 246 TS 247


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