BLASTX nr result

ID: Coptis25_contig00029187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029187
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus...   201   7e-50
ref|XP_003523380.1| PREDICTED: dehydrogenase/reductase SDR famil...   199   3e-49
ref|NP_196027.3| Rossmann-fold NAD(P)-binding domain-containing ...   196   3e-48
ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR famil...   194   2e-47
ref|XP_003526700.1| PREDICTED: dehydrogenase/reductase SDR famil...   194   2e-47

>ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223550345|gb|EEF51832.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 369

 Score =  201 bits (512), Expect = 7e-50
 Identities = 100/170 (58%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
 Frame = +3

Query: 135 ETIKFMCSSQFWRMGVLWTFHLFFSYFKLWFTQTLLPKSYQYPR-HPRVTQNRKSLCIIT 311
           ET+ F+ S +FWRM + WT  L  SYF+L+F       S+ YP   P  +   + LC+IT
Sbjct: 7   ETLHFIVSLEFWRMAIFWTISLIASYFELYFQNMFGRSSHPYPHCFPPTSGIARPLCVIT 66

Query: 312 GATSGLGKEAARALSREGFYVVLAGKSGDLLSQTMVELKQKDPDAHVKAFQVDMSSFQSM 491
           GATSGLG+ AA ALSREGF+VVLAG+S  LLS+T+  + +++ DA VKAF+VD++SFQS+
Sbjct: 67  GATSGLGEAAAYALSREGFFVVLAGRSSKLLSKTVERINKQNRDAQVKAFEVDLTSFQSI 126

Query: 492 LKFKSSLQQWLLDSDMHPSIQLLINNAGILATSHRFSAEGYDKMLGTNYV 641
           +KFK SL++WLLDSDMH SIQLLINNAGILATS R + EGYD+M+ TNYV
Sbjct: 127 IKFKGSLEKWLLDSDMHSSIQLLINNAGILATSQRLTTEGYDEMMVTNYV 176


>ref|XP_003523380.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome
           X-like [Glycine max]
          Length = 377

 Score =  199 bits (507), Expect = 3e-49
 Identities = 98/176 (55%), Positives = 128/176 (72%), Gaps = 6/176 (3%)
 Frame = +3

Query: 132 WETIKFMCSSQFWRMGVLWTFHLFFSYFKLWFT------QTLLPKSYQYPRHPRVTQNRK 293
           W    F+CS QFWRM +LWTF + +SY++L+             K   YPR    T   K
Sbjct: 11  WRAFFFLCSPQFWRMALLWTFSILYSYYQLFKPLIHEKCSLFSHKLVSYPRCSPFTTTFK 70

Query: 294 SLCIITGATSGLGKEAARALSREGFYVVLAGKSGDLLSQTMVELKQKDPDAHVKAFQVDM 473
            +C+ITGATSGLG  AA  LS+EG++VVL G+S  LLS+T+ ++K  + DAH++AFQVD+
Sbjct: 71  PVCVITGATSGLGLAAAYQLSKEGYFVVLVGRSQQLLSETITKIKDWNEDAHLEAFQVDL 130

Query: 474 SSFQSMLKFKSSLQQWLLDSDMHPSIQLLINNAGILATSHRFSAEGYDKMLGTNYV 641
           SS +S++KFK SLQQWLLDSD+H SIQ+LINNAGILATS R +AEGYD+M+GTNY+
Sbjct: 131 SSIESVVKFKMSLQQWLLDSDLHCSIQILINNAGILATSPRVTAEGYDQMIGTNYI 186


>ref|NP_196027.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis
           thaliana] gi|44681364|gb|AAS47622.1| At5g04070
           [Arabidopsis thaliana] gi|45773892|gb|AAS76750.1|
           At5g04070 [Arabidopsis thaliana]
           gi|332003310|gb|AED90693.1| Rossmann-fold NAD(P)-binding
           domain-containing protein [Arabidopsis thaliana]
          Length = 359

 Score =  196 bits (498), Expect = 3e-48
 Identities = 94/169 (55%), Positives = 125/169 (73%)
 Frame = +3

Query: 135 ETIKFMCSSQFWRMGVLWTFHLFFSYFKLWFTQTLLPKSYQYPRHPRVTQNRKSLCIITG 314
           E ++F+CSS FWRM + W   L FSYF+L       PKS       +   +   +C+ITG
Sbjct: 6   EALRFICSSNFWRMVLFWNIALLFSYFQLLKKSIFAPKSSSSSSCSKFNHSHTPVCVITG 65

Query: 315 ATSGLGKEAARALSREGFYVVLAGKSGDLLSQTMVELKQKDPDAHVKAFQVDMSSFQSML 494
           ATSGLGK  A ALSR+GFYVVL G+S  LLS+T+ ++K+++ DA +KAF+VDMSSFQ +L
Sbjct: 66  ATSGLGKATAFALSRKGFYVVLVGRSSHLLSKTLSDIKRQNEDAKLKAFEVDMSSFQLVL 125

Query: 495 KFKSSLQQWLLDSDMHPSIQLLINNAGILATSHRFSAEGYDKMLGTNYV 641
           KF+SSL+QWL +SD+H S+QLL+NNAGILATS R + EG+D+M+ TNYV
Sbjct: 126 KFRSSLEQWLFESDLHSSVQLLVNNAGILATSSRPTVEGFDRMIATNYV 174


>ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR family member on chromosome
           X-like [Vitis vinifera]
          Length = 467

 Score =  194 bits (492), Expect = 2e-47
 Identities = 103/171 (60%), Positives = 125/171 (73%), Gaps = 2/171 (1%)
 Frame = +3

Query: 135 ETIKFMCSSQFWRMGVLWTFHLFFSYFKLWFTQ-TLLPKSYQYPRHPRV-TQNRKSLCII 308
           E + F+ S QF RM + WT  L  SY  L+  +     KS  YPR P   T   + LCII
Sbjct: 9   EVLHFVFSLQFLRMALFWTLSLIISYLHLFIQRFPFSRKSNSYPRCPPANTATFRPLCII 68

Query: 309 TGATSGLGKEAARALSREGFYVVLAGKSGDLLSQTMVELKQKDPDAHVKAFQVDMSSFQS 488
           TGATSGLGK AA ALS+EGFYVVL G+S  LLS+TMVE+K+K+ +AH+K FQVD+SSF S
Sbjct: 69  TGATSGLGKAAAYALSKEGFYVVLVGRSSHLLSKTMVEIKEKNKNAHLKGFQVDLSSFHS 128

Query: 489 MLKFKSSLQQWLLDSDMHPSIQLLINNAGILATSHRFSAEGYDKMLGTNYV 641
           +LKFK SL+QWL DS+MH SIQLLINNAGILATS R + EG D+M+ TNY+
Sbjct: 129 ILKFKGSLEQWLADSNMHSSIQLLINNAGILATSCRLTTEGCDQMMATNYM 179


>ref|XP_003526700.1| PREDICTED: dehydrogenase/reductase SDR family member on chromosome
           X-like [Glycine max]
          Length = 387

 Score =  194 bits (492), Expect = 2e-47
 Identities = 96/186 (51%), Positives = 131/186 (70%), Gaps = 16/186 (8%)
 Frame = +3

Query: 132 WETIKFMCSSQFWRMGVLWTFHLFFSYFKLW--------FTQTLLP--------KSYQYP 263
           W    F+CS QFWRM +LWTF + +SY++L+        + + L+P        K   YP
Sbjct: 11  WRAFFFLCSLQFWRMALLWTFSILYSYYQLFKDSLSHSQYFKPLIPEKCSLFSQKLVSYP 70

Query: 264 RHPRVTQNRKSLCIITGATSGLGKEAARALSREGFYVVLAGKSGDLLSQTMVELKQKDPD 443
           R    T   + +C+ITGATSGLG  AA  LS+EG+ VVL G+S  LLS+T+ ++K ++  
Sbjct: 71  RCSPFTTTFRPVCVITGATSGLGLAAAYELSKEGYVVVLVGRSQQLLSETITKIKDRNEH 130

Query: 444 AHVKAFQVDMSSFQSMLKFKSSLQQWLLDSDMHPSIQLLINNAGILATSHRFSAEGYDKM 623
           AH++AFQVD+SS +S++KFK+SLQQW LDSD+H SIQ+LINNAGILATS R + EGYD+M
Sbjct: 131 AHLEAFQVDLSSIESVVKFKTSLQQWFLDSDLHCSIQILINNAGILATSPRVTPEGYDQM 190

Query: 624 LGTNYV 641
           +GTNY+
Sbjct: 191 IGTNYI 196


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