BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029180
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327997.1| GRAS family transcription factor [Populus tr...   134   8e-30
ref|XP_002309782.1| GRAS family transcription factor [Populus tr...   133   1e-29
emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]   132   3e-29
ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifer...   132   4e-29
ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine ...   123   2e-26

>ref|XP_002327997.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222837406|gb|EEE75785.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/115 (59%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 MKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLACXXXXXXXXXXXXXX 164
           +KCFEECLR+YT YFEMLEESFVPTSNERLMLERECSR+I+ VLAC              
Sbjct: 286 VKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNIVRVLACDEETGGGECERRER 345

Query: 163 GTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSLQPAQGVN-AGLYLAWKE 2
           G QWSE+L+ +F+P  +S      VKALLKRY++GW+L   QG + +G+YL WKE
Sbjct: 346 GVQWSERLREAFSPVGFSDDVVDDVKALLKRYKAGWALVLPQGDHESGIYLTWKE 400


>ref|XP_002309782.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222852685|gb|EEE90232.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 411

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/115 (59%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 MKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLACXXXXXXXXXXXXXX 164
           +KCFEECLR+YT YFEMLEESFVPTSNERLMLERECSR+I+ VLAC              
Sbjct: 286 VKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNIVRVLACDEGNDGGECERRER 345

Query: 163 GTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSLQPAQG-VNAGLYLAWKE 2
           G+QW E+L+ +F+P  +S      VKALLKRYR+GW+L   QG  ++G+YL WKE
Sbjct: 346 GSQWFERLREAFSPVGFSDDVVDDVKALLKRYRAGWALVLPQGDHDSGIYLTWKE 400


>emb|CAN61051.1| hypothetical protein VITISV_023622 [Vitis vinifera]
          Length = 436

 Score =  132 bits (332), Expect = 3e-29
 Identities = 74/119 (62%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
 Frame = -3

Query: 343 MKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLAC--XXXXXXXXXXXX 170
           +KCFEECLRFYT YFEMLEESFVPTSNERLMLERECSRSI+ VLAC              
Sbjct: 307 VKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRSIVRVLACDDIEDDTGEDCERR 366

Query: 169 XXGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSL-QPAQGVN--AGLYLAWKE 2
             G QWSE LK  F+P  +S      VKALLKRYRSGW+L  P QG N   G+YL WK+
Sbjct: 367 EKGIQWSEGLKEXFSPLGFSEDVVDDVKALLKRYRSGWALVPPQQGENHQLGIYLTWKD 425


>ref|XP_002272196.1| PREDICTED: protein SHORT-ROOT [Vitis vinifera]
           gi|296081342|emb|CBI17688.3| unnamed protein product
           [Vitis vinifera]
          Length = 436

 Score =  132 bits (331), Expect = 4e-29
 Identities = 74/119 (62%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
 Frame = -3

Query: 343 MKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLAC--XXXXXXXXXXXX 170
           +KCFEECLRFYT YFEMLEESFVPTSNERLMLERECSRSI+ VLAC              
Sbjct: 307 VKCFEECLRFYTLYFEMLEESFVPTSNERLMLERECSRSIVRVLACDDIEDDTGEDCERR 366

Query: 169 XXGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSL-QPAQGVN--AGLYLAWKE 2
             G QWSE LK  F+P  +S      VKALLKRYRSGW+L  P QG N   G+YL WK+
Sbjct: 367 EKGIQWSEGLKEVFSPLGFSEDVVDDVKALLKRYRSGWALVPPQQGENHQLGIYLTWKD 425


>ref|XP_003546837.1| PREDICTED: protein SHORT-ROOT-like [Glycine max]
          Length = 437

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/122 (54%), Positives = 80/122 (65%), Gaps = 8/122 (6%)
 Frame = -3

Query: 343 MKCFEECLRFYTYYFEMLEESFVPTSNERLMLERECSRSIISVLAC------XXXXXXXX 182
           +KCFEECL+FYT YFEMLEESF PTSNERLMLERECSR+I+ VLAC              
Sbjct: 305 VKCFEECLKFYTLYFEMLEESFPPTSNERLMLERECSRTIVRVLACCGSGEFEDDGEFDC 364

Query: 181 XXXXXXGTQWSEKLKVSFTPFLYSXXXXXXVKALLKRYRSGWSLQPAQGVN--AGLYLAW 8
                 G QW E+L+ +F+P  +S      VKALLKRY+ GWSL  +QG    +G+YL W
Sbjct: 365 CERRERGIQWCERLRSAFSPSGFSDDVVDDVKALLKRYQPGWSLVVSQGDEHLSGIYLTW 424

Query: 7   KE 2
           KE
Sbjct: 425 KE 426