BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029173
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   340   3e-91
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]   327   2e-87
gb|ABW74566.1| integrase [Boechera divaricarpa]                       322   5e-86
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   295   7e-78
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   292   6e-77

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  340 bits (871), Expect = 3e-91
 Identities = 160/261 (61%), Positives = 200/261 (76%)
 Frame = -2

Query: 844  VDLLKKFHMVNCVTSSTPMNTDEKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAV 665
            VDLLKKF+M+NC   +TPMN++EKL   DGT  AD R FRS+VGGL+YLTH+RPDI FAV
Sbjct: 1010 VDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAV 1069

Query: 664  SLVSRFMHIPYVHHLGAAKRILCYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKS 485
             ++SRFMH P   HLGAAKR+L YI  T  +GIWYG V +F LVG+ DSDW G ++DRKS
Sbjct: 1070 GVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKS 1129

Query: 484  ASGFIFSLGPGAISWLSKKQATVALSSCEAEYMAATSATCQAIWMQRILADLHLVQAAPT 305
             SG++FSLG GA+ W SKKQA  ALSS EAEY AATS+ CQA+W++RILAD++     PT
Sbjct: 1130 XSGYMFSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRILADINQEHEEPT 1189

Query: 304  EIFCNNKATIGITKNPVFHGRTKHIELRHHFIRDVITEGKIVMQYCSTNDQTVDGFTKAL 125
             I+C+NKA I +TKNP +HGRTKH+++R HFIRD++ EGK+V+QYC+TN+Q  D  TKAL
Sbjct: 1190 VIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKAL 1249

Query: 124  SYPKFLKFRSSLNVLPFCIKG 62
            S  K + FRS L V  F  +G
Sbjct: 1250 SRDKHVYFRSKLGVCNFESRG 1270


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score =  327 bits (838), Expect = 2e-87
 Identities = 155/261 (59%), Positives = 195/261 (74%)
 Frame = -2

Query: 844  VDLLKKFHMVNCVTSSTPMNTDEKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAV 665
            VDLLKKF+M+NC   +TPMN++EKL   DGT  AD R FRS+VGGL+YLTH+RPD  FAV
Sbjct: 919  VDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDXAFAV 978

Query: 664  SLVSRFMHIPYVHHLGAAKRILCYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKS 485
             ++SRFMH P   HLGAAKR+L YI  T  + IWYG V +F LVG+ DSDW G ++DRKS
Sbjct: 979  GVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGCLEDRKS 1038

Query: 484  ASGFIFSLGPGAISWLSKKQATVALSSCEAEYMAATSATCQAIWMQRILADLHLVQAAPT 305
             SG++FSLG GA+ W SKKQA  ALSS EAEY AATS+ CQA+W++RIL D++      T
Sbjct: 1039 TSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRILVDINQEHEEXT 1098

Query: 304  EIFCNNKATIGITKNPVFHGRTKHIELRHHFIRDVITEGKIVMQYCSTNDQTVDGFTKAL 125
             I+C+NKA I +TKNP +HGRTKH+++R HFIRD++ EG +V+QYC+TN+Q  D  TKAL
Sbjct: 1099 VIYCDNKAAIAMTKNPAYHGRTKHVBIRVHFIRDLVVEGXVVLQYCNTNEQVADVRTKAL 1158

Query: 124  SYPKFLKFRSSLNVLPFCIKG 62
            S  K + FRS L V  F  +G
Sbjct: 1159 SRDKHVYFRSKLGVCNFESRG 1179


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  322 bits (826), Expect = 5e-86
 Identities = 156/256 (60%), Positives = 185/256 (72%)
 Frame = -2

Query: 841  DLLKKFHMVNCVTSSTPMNTDEKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAVS 662
            DLLK+F M  C    TPMN +EKL   DGT  AD   FRS+VGGL+YLTH+RPDI FAVS
Sbjct: 902  DLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDICFAVS 961

Query: 661  LVSRFMHIPYVHHLGAAKRILCYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSA 482
             +SRFMH P   H GAAKR+L YI  T  YG+WY  VSKF LVGF DSDW G V DRKS 
Sbjct: 962  AISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQDRKST 1021

Query: 481  SGFIFSLGPGAISWLSKKQATVALSSCEAEYMAATSATCQAIWMQRILADLHLVQAAPTE 302
            SG +F+LG GA+ W SKKQ   ALSS EAEY AAT+A CQA+W++RILAD+   Q   T 
Sbjct: 1022 SGHVFNLGSGAVCWSSKKQNVTALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATT 1081

Query: 301  IFCNNKATIGITKNPVFHGRTKHIELRHHFIRDVITEGKIVMQYCSTNDQTVDGFTKALS 122
            IFC+NKATI + KNP +HGRTKHI ++ HFIRD+++EG + ++YCSTN+Q+ D  TKALS
Sbjct: 1082 IFCDNKATIAMNKNPAYHGRTKHISIKVHFIRDLVSEGSVTLEYCSTNEQSADVLTKALS 1141

Query: 121  YPKFLKFRSSLNVLPF 74
              KF  FRS L V  F
Sbjct: 1142 RNKFDYFRSKLGVCKF 1157


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  295 bits (756), Expect = 7e-78
 Identities = 142/260 (54%), Positives = 185/260 (71%)
 Frame = -2

Query: 841  DLLKKFHMVNCVTSSTPMNTDEKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAVS 662
            DLLKKF M+NC  ++TPMN +EKL   DGT  A+ +LFRS+VGGL YLTH+RPDI F+VS
Sbjct: 1071 DLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVS 1130

Query: 661  LVSRFMHIPYVHHLGAAKRILCYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSA 482
            +VSRF+  P   H GAAKR+L Y+  TT +GIWY     F LVGF DSD+ G +DDRKS 
Sbjct: 1131 VVSRFLQSPTKQHFGAAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKST 1190

Query: 481  SGFIFSLGPGAISWLSKKQATVALSSCEAEYMAATSATCQAIWMQRILADLHLVQAAPTE 302
            SG  FS G G ++W SKKQ TVALS+ EAEY AA+ A  QA+W++++L D    Q   TE
Sbjct: 1191 SGSCFSFGSGVVTWSSKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTE 1250

Query: 301  IFCNNKATIGITKNPVFHGRTKHIELRHHFIRDVITEGKIVMQYCSTNDQTVDGFTKALS 122
            IF ++K+ I + KNP FHGRTKHI++++HFIR ++ +G+IV+++CSTN+Q  D FTK+L 
Sbjct: 1251 IFSDSKSAIAMAKNPSFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLP 1310

Query: 121  YPKFLKFRSSLNVLPFCIKG 62
              K   FR  L V  F  +G
Sbjct: 1311 QAKHEYFRLQLGVCDFESRG 1330


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  292 bits (748), Expect = 6e-77
 Identities = 141/257 (54%), Positives = 179/257 (69%)
 Frame = -2

Query: 844  VDLLKKFHMVNCVTSSTPMNTDEKLTLTDGTPTADERLFRSMVGGLMYLTHSRPDIMFAV 665
            VDLLKKF+M+NC   + PMN++EKL   DGT  AD R FRS+VGGL+YLTH+RPDI FAV
Sbjct: 1170 VDLLKKFNMLNCKVVAIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAV 1229

Query: 664  SLVSRFMHIPYVHHLGAAKRILCYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKS 485
             ++SRFMH P   HLGA KR+L YI  T  + IW G V +F LVG+ DSDW G ++DRKS
Sbjct: 1230 GVISRFMHCPSKQHLGATKRLLRYIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKS 1289

Query: 484  ASGFIFSLGPGAISWLSKKQATVALSSCEAEYMAATSATCQAIWMQRILADLHLVQAAPT 305
             SG++FSLG                    AEY  ATS+ CQA+W++RILAD++     PT
Sbjct: 1290 TSGYMFSLG-------------------SAEYTVATSSACQAVWLRRILADINQEHEEPT 1330

Query: 304  EIFCNNKATIGITKNPVFHGRTKHIELRHHFIRDVITEGKIVMQYCSTNDQTVDGFTKAL 125
             I+C+NKA I +TKNP +HGRTKH+++R HFIRD++ EGK+V+QYC+TN+Q  D  TKAL
Sbjct: 1331 VIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKAL 1390

Query: 124  SYPKFLKFRSSLNVLPF 74
            S  K + FRS L V  F
Sbjct: 1391 SRDKHVYFRSKLGVCNF 1407



 Score =  157 bits (396), Expect = 4e-36
 Identities = 76/154 (49%), Positives = 96/154 (62%)
 Frame = -2

Query: 646 MHIPYVHHLGAAKRILCYIRATTSYGIWYGPVSKFSLVGFADSDWVGSVDDRKSASGFIF 467
           MH     HLGAA R+L YI  T  + IWYG V +F LVG+ DSDW G V           
Sbjct: 1   MHCSSKQHLGAAXRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGXV----------- 49

Query: 466 SLGPGAISWLSKKQATVALSSCEAEYMAATSATCQAIWMQRILADLHLVQAAPTEIFCNN 287
                   W SKKQA   LSS EAEY A TS+ CQA+W++RIL D++      T I+C+N
Sbjct: 50  -------CWXSKKQAVTXLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDN 102

Query: 286 KATIGITKNPVFHGRTKHIELRHHFIRDVITEGK 185
           KA I +TKNP +HGRTKH+++R HFIRD++ EG+
Sbjct: 103 KAAIAMTKNPAYHGRTKHVDIRVHFIRDLVVEGE 136