BLASTX nr result

ID: Coptis25_contig00029163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00029163
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275901.2| PREDICTED: uncharacterized protein LOC100242...   370   e-100
ref|XP_004139811.1| PREDICTED: uncharacterized protein LOC101209...   360   3e-97
emb|CAN60471.1| hypothetical protein VITISV_028411 [Vitis vinife...   358   2e-96
gb|AFK46399.1| unknown [Lotus japonicus]                              355   1e-95
ref|XP_002267280.1| PREDICTED: uncharacterized protein LOC100261...   353   3e-95

>ref|XP_002275901.2| PREDICTED: uncharacterized protein LOC100242287 [Vitis vinifera]
          Length = 297

 Score =  370 bits (950), Expect = e-100
 Identities = 197/273 (72%), Positives = 214/273 (78%), Gaps = 15/273 (5%)
 Frame = -2

Query: 1006 FSCARQYSFNQPLSCIASSS--------SRWVFGASRKYSR-------HSSSKQMWFCGS 872
            FS      F  P   ++S S        S + F +S+ + R         SS+  W CG 
Sbjct: 25   FSSKSLIFFQSPSPSLSSPSPNPFNPFPSYYSFSSSQSHRRCVPEKGSSLSSRHKWICGH 84

Query: 871  KGRDQDESTSETEANNEVHMRGYDEEVTTQVPTQVQSLVEGSGSRLVSEFKPAPDVDYLQ 692
              +DQD  +   E  N   +   DEEV +QVPTQ QSLVEGSG+ LVSEFKP PDVDYLQ
Sbjct: 85   MRKDQDGGSWRDEEENPGRIFCSDEEVASQVPTQAQSLVEGSGAVLVSEFKPVPDVDYLQ 144

Query: 691  ELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIFTSGASGTNAAVIRGAL 512
            ELLAIQQQGPRAIGFFGTRNMGF HQELIEILSYAMVITKNHIFTSGASGTNAAVIRGAL
Sbjct: 145  ELLAIQQQGPRAIGFFGTRNMGFTHQELIEILSYAMVITKNHIFTSGASGTNAAVIRGAL 204

Query: 511  RAEKPELLTVILPQSLQKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDILSHVQ 332
            RAEKPELLTVILPQSL+ QPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDI+SHVQ
Sbjct: 205  RAEKPELLTVILPQSLKMQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQ 264

Query: 331  QVICFAFHDSRLLMETCQEAKDMRKIVTLFYLD 233
            QVICFAFHDS+LLMETCQEAK++RKIVTLFYLD
Sbjct: 265  QVICFAFHDSKLLMETCQEAKNLRKIVTLFYLD 297


>ref|XP_004139811.1| PREDICTED: uncharacterized protein LOC101209189 [Cucumis sativus]
           gi|449492610|ref|XP_004159047.1| PREDICTED:
           uncharacterized LOC101209189 [Cucumis sativus]
          Length = 275

 Score =  360 bits (925), Expect = 3e-97
 Identities = 185/237 (78%), Positives = 207/237 (87%), Gaps = 2/237 (0%)
 Frame = -2

Query: 937 VFGASRKYSRHSSSKQMWFCGSKGRDQDESTSETEANNEVHMRGY--DEEVTTQVPTQVQ 764
           +F +SR+  R S +  +W  G    D D  +S  + NN + M G+  ++E  TQ+PTQ Q
Sbjct: 41  LFVSSRR--RSSLNTSLWIRGHIRGDTDGDSSVPQKNNTMRMFGFGSNDETGTQIPTQAQ 98

Query: 763 SLVEGSGSRLVSEFKPAPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAM 584
           S+VEGSGS +VSEFKP PDVDYLQELLAIQQQGPRAIGFFGTRNMGF+HQELIEILSYAM
Sbjct: 99  SIVEGSGSVMVSEFKPVPDVDYLQELLAIQQQGPRAIGFFGTRNMGFLHQELIEILSYAM 158

Query: 583 VITKNHIFTSGASGTNAAVIRGALRAEKPELLTVILPQSLQKQPPESQELLSKVKNVIEK 404
           VITKNHI+TSGASGTNAAVIRGALRAEKPELLTVILPQSL+KQPPESQELLSKV+NVIEK
Sbjct: 159 VITKNHIYTSGASGTNAAVIRGALRAEKPELLTVILPQSLKKQPPESQELLSKVRNVIEK 218

Query: 403 PYNDHLPLIEASRLCNMDILSHVQQVICFAFHDSRLLMETCQEAKDMRKIVTLFYLD 233
           P+NDHL LIEASRLCNMDI+SHVQQVICFAFHDSRLLMETCQEAK++RKIVTLFYLD
Sbjct: 219 PHNDHLSLIEASRLCNMDIISHVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 275


>emb|CAN60471.1| hypothetical protein VITISV_028411 [Vitis vinifera]
           gi|296084366|emb|CBI24754.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score =  358 bits (918), Expect = 2e-96
 Identities = 182/211 (86%), Positives = 192/211 (90%)
 Frame = -2

Query: 865 RDQDESTSETEANNEVHMRGYDEEVTTQVPTQVQSLVEGSGSRLVSEFKPAPDVDYLQEL 686
           +DQD  +   E  N   +   DEEV +QVPTQ QSLVEGSG+ LVSEFKP PDVDYLQEL
Sbjct: 3   KDQDGGSWRDEEENPGRIFCSDEEVASQVPTQAQSLVEGSGAVLVSEFKPVPDVDYLQEL 62

Query: 685 LAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIFTSGASGTNAAVIRGALRA 506
           LAIQQQGPRAIGFFGTRNMGF HQELIEILSYAMVITKNHIFTSGASGTNAAVIRGALRA
Sbjct: 63  LAIQQQGPRAIGFFGTRNMGFTHQELIEILSYAMVITKNHIFTSGASGTNAAVIRGALRA 122

Query: 505 EKPELLTVILPQSLQKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDILSHVQQV 326
           EKPELLTVILPQSL+ QPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDI+SHVQQV
Sbjct: 123 EKPELLTVILPQSLKMQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDIISHVQQV 182

Query: 325 ICFAFHDSRLLMETCQEAKDMRKIVTLFYLD 233
           ICFAFHDS+LLMETCQEAK++RKIVTLFYLD
Sbjct: 183 ICFAFHDSKLLMETCQEAKNLRKIVTLFYLD 213


>gb|AFK46399.1| unknown [Lotus japonicus]
          Length = 288

 Score =  355 bits (911), Expect = 1e-95
 Identities = 178/221 (80%), Positives = 193/221 (87%)
 Frame = -2

Query: 895 KQMWFCGSKGRDQDESTSETEANNEVHMRGYDEEVTTQVPTQVQSLVEGSGSRLVSEFKP 716
           ++ W  G   RDQD  T + E  N + + G DE+  TQ+PTQ QSLVEG G+  V+E+KP
Sbjct: 68  RRTWLYGHMKRDQDRHTPDYELENGLGLFGSDEQRGTQIPTQAQSLVEGPGAIRVAEYKP 127

Query: 715 APDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIFTSGASGTN 536
            PDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHI+T GASGTN
Sbjct: 128 VPDVDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIYTPGASGTN 187

Query: 535 AAVIRGALRAEKPELLTVILPQSLQKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCN 356
           AAVIRGALRAEKP+ LTVILPQSL KQPPESQELLSKVK VIEKPYNDHLPLIEASRLCN
Sbjct: 188 AAVIRGALRAEKPDFLTVILPQSLSKQPPESQELLSKVKKVIEKPYNDHLPLIEASRLCN 247

Query: 355 MDILSHVQQVICFAFHDSRLLMETCQEAKDMRKIVTLFYLD 233
           MDI+S VQQVICFAFHDSRLLMETCQEAK++RKIVTLFYLD
Sbjct: 248 MDIISKVQQVICFAFHDSRLLMETCQEAKNLRKIVTLFYLD 288


>ref|XP_002267280.1| PREDICTED: uncharacterized protein LOC100261763 [Vitis vinifera]
          Length = 286

 Score =  353 bits (907), Expect = 3e-95
 Identities = 176/218 (80%), Positives = 197/218 (90%)
 Frame = -2

Query: 886 WFCGSKGRDQDESTSETEANNEVHMRGYDEEVTTQVPTQVQSLVEGSGSRLVSEFKPAPD 707
           W CG   RDQD  +S  +  N VHM G D+EV TQVPTQ QS+VEGSGS LVS ++P  D
Sbjct: 69  WLCGYMRRDQDMDSSRNDEVNGVHMFGSDDEVFTQVPTQAQSVVEGSGSLLVSGYEPVTD 128

Query: 706 VDYLQELLAIQQQGPRAIGFFGTRNMGFMHQELIEILSYAMVITKNHIFTSGASGTNAAV 527
           +DYLQELLAIQQ+GPRAIGFFGTRNMGF+HQELIEILSYAMVIT+NHI+TSGASGTNAAV
Sbjct: 129 MDYLQELLAIQQEGPRAIGFFGTRNMGFLHQELIEILSYAMVITENHIYTSGASGTNAAV 188

Query: 526 IRGALRAEKPELLTVILPQSLQKQPPESQELLSKVKNVIEKPYNDHLPLIEASRLCNMDI 347
           IRGALRAEKPELLTVILPQSL+KQPPESQELLSKV+NVIEKP+NDHL LIEASRLCN+DI
Sbjct: 189 IRGALRAEKPELLTVILPQSLKKQPPESQELLSKVQNVIEKPHNDHLHLIEASRLCNLDI 248

Query: 346 LSHVQQVICFAFHDSRLLMETCQEAKDMRKIVTLFYLD 233
           ++ VQQVICFAFHDS+LLMETCQEA+++RKIVTLFYLD
Sbjct: 249 ITCVQQVICFAFHDSKLLMETCQEARNLRKIVTLFYLD 286


Top